RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CACTIN-AS1Q8N1I8 211 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 TTC16Q8NEE8 873 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 PIK3R5Q8WYR1 880 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 FBXL18Q96ME1 805 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 SAP130Q9H0E3 1048 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 ATG3Q9NT62 314 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 ZBTB7CA1YPR0 619 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 H3BRB1 525 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 FSCN2O14926 492 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 F13BP05160 661 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 FOSL1P15407 271 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 CDC27P30260 824 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 ZAP70P43403 619 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 EHHADHQ08426 723 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 CEP135Q66GS9 1140 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 TUT1Q9H6E5 874 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 KCNMB2Q9Y691 235 aa5.98□□□□□ -1.45
ECHDC1-213ENST00000474240 SOWAHDA6NJG2 315 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 EPHA1P21709 976 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 SERPINB4P48594 390 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 ANKRD34AQ69YU3 496 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 CAPN12Q6ZSI9 719 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 AEBP1Q8IUX7 1158 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 ETFBKMTQ8IXQ9 262 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 CITED4Q96RK1 184 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 OSBPL1AQ9BXW6 950 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 HIF3AQ9Y2N7 669 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 IVNS1ABPQ9Y6Y0 642 aa5.97□□□□□ -1.45
ECHDC1-213ENST00000474240 KRTAP9-7A8MTY7 169 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 NDUFB5O43674 189 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 GAS2O43903 313 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 PRNPP04156 253 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 MPSTP25325 297 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 MZF1P28698 734 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 EIF1AXP47813 144 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 ZNF211Q13398 564 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 AAMPQ13685 434 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 SGO2Q562F6 1265 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 COL13A1Q5TAT6 717 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 FAM117BQ6P1L5 589 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 KLHL23Q8NBE8 558 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 GIMAP7Q8NHV1 300 aa5.96□□□□□ -1.46
ECHDC1-213ENST00000474240 SMNDC1O75940 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 PAPLNO95428 1278 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 MAP4P27816 1152 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 PDE3BQ13370 1112 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 TRIP4Q15650 581 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 PDE12Q6L8Q7 609 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 FDX2Q6P4F2 183 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 SHISA5Q8N114 240 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 FLCNQ8NFG4 579 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 KLHDC7BQ96G42 594 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 RNF208Q9H0X6 261 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 SH2B1Q9NRF2 756 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 BRPF3Q9ULD4 1205 aa5.95□□□□□ -1.46
ECHDC1-213ENST00000474240 DBX1A6NMT0 343 aa5.94□□□□□ -1.46
ECHDC1-213ENST00000474240 NEFLP07196 543 aa5.94□□□□□ -1.46
ECHDC1-213ENST00000474240 RXRBP28702 533 aa5.94□□□□□ -1.46
ECHDC1-213ENST00000474240 NLRP12P59046 1061 aa5.94□□□□□ -1.46
ECHDC1-213ENST00000474240 NLRP13Q86W25 1043 aa5.94□□□□□ -1.46
ECHDC1-213ENST00000474240 RUSC1Q9BVN2 902 aa5.94□□□□□ -1.46
ECHDC1-213ENST00000474240 RASSF4Q9H2L5 321 aa5.94□□□□□ -1.46
ECHDC1-213ENST00000474240 SCNN1AP37088 669 aa5.93□□□□□ -1.46
ECHDC1-213ENST00000474240 SND1Q7KZF4 910 aaKnown RBP eCLIP5.93□□□□□ -1.46
ECHDC1-213ENST00000474240 OR13H1Q8NG92 308 aa5.93□□□□□ -1.46
ECHDC1-213ENST00000474240 SEC31BQ9NQW1 1179 aa5.93□□□□□ -1.46
ECHDC1-213ENST00000474240 BIN2Q9UBW5 565 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-213ENST00000474240 UBAP1LF5GYI3 381 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 PDGFAP04085 211 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 HYAL2Q12891 473 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 MTMR3Q13615 1198 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 XKR5Q6UX68 686 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 AGBL5Q8NDL9 886 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 GPR152Q8TDT2 470 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 EDEM1Q92611 657 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 SPACA7Q96KW9 195 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 DMRTB1Q96MA1 342 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 ANO2Q9NQ90 1003 aa5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 PAK6Q9NQU5 681 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 BSDC1Q9NW68 430 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-213ENST00000474240 CYP26A1O43174 497 aa5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 ARHGAP4P98171 946 aa5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 DNM1Q05193 864 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 CPSF6Q16630 551 aaKnown RBP eCLIP5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 ZSCAN29Q8IWY8 852 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 NUDT16Q96DE0 195 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 DCTN4Q9UJW0 460 aa5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-213ENST00000474240 H3BRJ5 948 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 ZBTB39O15060 712 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 FZD6O60353 706 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 PTPRAP18433 802 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 ZNF438Q7Z4V0 828 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 GJD3Q8N144 294 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 PMEPA1Q969W9 287 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 RBCK1Q9BYM8 510 aa5.9□□□□□ -1.46
ECHDC1-213ENST00000474240 FAM177BA6PVY3 158 aa5.89□□□□□ -1.47
ECHDC1-213ENST00000474240 ERCC3P19447 782 aa5.89□□□□□ -1.47
ECHDC1-213ENST00000474240 TTC39BQ5VTQ0 682 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms