RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 PIH1D3Q9NQM4 214 aaKnown RBP24.95■■□□□ 1.59
RNF220-209ENST00000474064 SPATA31A6Q5VVP1 1343 aa24.95■■□□□ 1.58
RNF220-209ENST00000474064 ZFYP08048 801 aaPredicted RBP24.95■■□□□ 1.58
RNF220-209ENST00000474064 ZSCAN22P10073 491 aaPredicted RBP24.95■■□□□ 1.58
RNF220-209ENST00000474064 HSP90B1P14625 803 aaKnown RBP24.95■■□□□ 1.58
RNF220-209ENST00000474064 IGHMBP2P38935 993 aaKnown RBP24.95■■□□□ 1.58
RNF220-209ENST00000474064 HMGN5P82970 282 aaKnown RBP24.94■■□□□ 1.58
RNF220-209ENST00000474064 PPP4R3BQ5MIZ7 849 aa24.94■■□□□ 1.58
RNF220-209ENST00000474064 SRP68Q9UHB9 627 aaKnown RBP24.94■■□□□ 1.58
RNF220-209ENST00000474064 FGFR2P21802 821 aa24.94■■□□□ 1.58
RNF220-209ENST00000474064 HAND2P61296 217 aa24.94■■□□□ 1.58
RNF220-209ENST00000474064 NOLC1Q14978 699 aaKnown RBP eCLIP24.94■■□□□ 1.58
RNF220-209ENST00000474064 SLC9C2Q5TAH2 1124 aa24.94■■□□□ 1.58
RNF220-209ENST00000474064 C3orf67Q6ZVT6 689 aa24.94■■□□□ 1.58
RNF220-209ENST00000474064 SPEF2Q9C093 1822 aa24.94■■□□□ 1.58
RNF220-209ENST00000474064 TPRNQ4KMQ1 711 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 TICAM2Q86XR7 235 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 PIBF1Q8WXW3 757 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 APPBP2Q92624 585 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 GNPATO15228 680 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 SLC5A1P13866 664 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 GTF2E1P29083 439 aaPredicted RBP24.93■■□□□ 1.58
RNF220-209ENST00000474064 CLEC4GQ6UXB4 293 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 BRF1Q92994 677 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 ALDH8A1Q9H2A2 487 aaPredicted RBP24.93■■□□□ 1.58
RNF220-209ENST00000474064 ABCC12Q96J65 1359 aa24.93■■□□□ 1.58
RNF220-209ENST00000474064 VPS37CA5D8V6 355 aaPredicted RBP24.92■■□□□ 1.58
RNF220-209ENST00000474064 TBC1D9BQ66K14 1250 aa24.92■■□□□ 1.58
RNF220-209ENST00000474064 CHST3Q7LGC8 479 aa24.92■■□□□ 1.58
RNF220-209ENST00000474064 C17orf53Q8N3J3 647 aaPredicted RBP24.92■■□□□ 1.58
RNF220-209ENST00000474064 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.92■■□□□ 1.58
RNF220-209ENST00000474064 CCNL1Q9UK58 526 aaPredicted RBP24.92■■□□□ 1.58
RNF220-209ENST00000474064 COL5A3P25940 1745 aaPredicted RBP24.92■■□□□ 1.58
RNF220-209ENST00000474064 E7EWF7 191 aa24.92■■□□□ 1.58
RNF220-209ENST00000474064 GTF2F1P35269 517 aaKnown RBP eCLIP24.92■■□□□ 1.582e-6■■■■□ 23.4
RNF220-209ENST00000474064 FOXP2O15409 715 aa24.92■■□□□ 1.58
RNF220-209ENST00000474064 GTPBP4Q9BZE4 634 aaKnown RBP24.92■■□□□ 1.58
RNF220-209ENST00000474064 GPAA1O43292 621 aa24.91■■□□□ 1.58
RNF220-209ENST00000474064 HSPA1LP34931 641 aa24.91■■□□□ 1.58
RNF220-209ENST00000474064 GJD4Q96KN9 370 aaPredicted RBP24.91■■□□□ 1.58
RNF220-209ENST00000474064 CNTNAP4Q9C0A0 1308 aa24.91■■□□□ 1.58
RNF220-209ENST00000474064 CCDC24Q8N4L8 307 aa24.91■■□□□ 1.58
RNF220-209ENST00000474064 ZNF512BQ96KM6 892 aaPredicted RBP24.91■■□□□ 1.58
RNF220-209ENST00000474064 KIF3AQ9Y496 699 aa24.91■■□□□ 1.58
RNF220-209ENST00000474064 F13A1P00488 732 aa24.9■■□□□ 1.58
RNF220-209ENST00000474064 ARID4AP29374 1257 aaPredicted RBP24.9■■□□□ 1.58
RNF220-209ENST00000474064 TTC12Q9H892 705 aaPredicted RBP24.9■■□□□ 1.58
RNF220-209ENST00000474064 DDX60Q8IY21 1712 aaKnown RBP24.9■■□□□ 1.58
RNF220-209ENST00000474064 UQCRFS1P1P0C7P4 283 aa24.9■■□□□ 1.58
RNF220-209ENST00000474064 CHRNDQ07001 517 aa24.9■■□□□ 1.58
RNF220-209ENST00000474064 DHX32Q7L7V1 743 aaKnown RBP24.9■■□□□ 1.58
RNF220-209ENST00000474064 AMIGO3Q86WK7 504 aa24.9■■□□□ 1.58
RNF220-209ENST00000474064 BCL2L12Q9HB09 334 aa24.9■■□□□ 1.58
RNF220-209ENST00000474064 MTMR6Q9Y217 621 aa24.9■■□□□ 1.58
RNF220-209ENST00000474064 CNPY2Q9Y2B0 182 aa24.9■■□□□ 1.58
RNF220-209ENST00000474064 CICQ96RK0 1608 aaPredicted RBP24.89■■□□□ 1.58
RNF220-209ENST00000474064 AFF2P51816 1311 aa24.89■■□□□ 1.58
RNF220-209ENST00000474064 FGAP02671 866 aa24.89■■□□□ 1.58
RNF220-209ENST00000474064 ADD2P35612 726 aa24.89■■□□□ 1.58
RNF220-209ENST00000474064 BCAMP50895 628 aa24.89■■□□□ 1.58
RNF220-209ENST00000474064 TTF1Q15361 905 aaPredicted RBP24.89■■□□□ 1.58
RNF220-209ENST00000474064 LARP1BQ659C4 914 aaKnown RBP24.89■■□□□ 1.58
RNF220-209ENST00000474064 WWC3Q9ULE0 1092 aa24.89■■□□□ 1.58
RNF220-209ENST00000474064 RASGRF1Q13972 1273 aa24.89■■□□□ 1.57
RNF220-209ENST00000474064 LRP5O75197 1615 aa24.89■■□□□ 1.57
RNF220-209ENST00000474064 AKAP11Q9UKA4 1901 aa24.89■■□□□ 1.57
RNF220-209ENST00000474064 USP48Q86UV5 1035 aa24.88■■□□□ 1.57
RNF220-209ENST00000474064 SPATA5Q8NB90 893 aa24.88■■□□□ 1.57
RNF220-209ENST00000474064 NAP1L2Q9ULW6 460 aaPredicted RBP24.88■■□□□ 1.57
RNF220-209ENST00000474064 HMGB1P09429 215 aaKnown RBP24.88■■□□□ 1.57
RNF220-209ENST00000474064 USP25Q9UHP3 1055 aa24.88■■□□□ 1.57
RNF220-209ENST00000474064 EP400Q96L91 3159 aa24.88■■□□□ 1.57
RNF220-209ENST00000474064 ZNF532Q9HCE3 1301 aa24.88■■□□□ 1.57
RNF220-209ENST00000474064 GADD45BO75293 160 aaPredicted RBP24.87■■□□□ 1.57
RNF220-209ENST00000474064 KIF20AO95235 890 aa24.87■■□□□ 1.57
RNF220-209ENST00000474064 ZSCAN25Q6NSZ9 544 aa24.87■■□□□ 1.57
RNF220-209ENST00000474064 CERKQ8TCT0 537 aa24.87■■□□□ 1.57
RNF220-209ENST00000474064 JAK2O60674 1132 aa24.87■■□□□ 1.57
RNF220-209ENST00000474064 ZPR1O75312 459 aa24.87■■□□□ 1.57
RNF220-209ENST00000474064 APOBRQ0VD83 1088 aa24.87■■□□□ 1.57
RNF220-209ENST00000474064 COL4A1P02462 1669 aa24.87■■□□□ 1.57
RNF220-209ENST00000474064 WTIPA6NIX2 430 aaPredicted RBP24.86■■□□□ 1.57
RNF220-209ENST00000474064 SPDYE4A6NLX3 237 aa24.86■■□□□ 1.57
RNF220-209ENST00000474064 RPS6KA4O75676 772 aa24.86■■□□□ 1.57
RNF220-209ENST00000474064 PHF14O94880 888 aa24.86■■□□□ 1.57
RNF220-209ENST00000474064 CDC5LQ99459 802 aaKnown RBP24.86■■□□□ 1.57
RNF220-209ENST00000474064 IQSEC3Q9UPP2 1182 aaPredicted RBP24.86■■□□□ 1.57
RNF220-209ENST00000474064 PDE6AP16499 860 aa24.86■■□□□ 1.57
RNF220-209ENST00000474064 IMMTQ16891 758 aaKnown RBP24.86■■□□□ 1.57
RNF220-209ENST00000474064 GTF3C6Q969F1 213 aa24.86■■□□□ 1.57
RNF220-209ENST00000474064 SYAP1Q96A49 352 aaPredicted RBP24.86■■□□□ 1.57
RNF220-209ENST00000474064 CTNNA3Q9UI47 895 aa24.86■■□□□ 1.57
RNF220-209ENST00000474064 BTAF1O14981 1849 aa24.86■■□□□ 1.57
RNF220-209ENST00000474064 APPP05067 770 aa24.85■■□□□ 1.57
RNF220-209ENST00000474064 FERMT3Q86UX7 667 aa24.85■■□□□ 1.57
RNF220-209ENST00000474064 NARFQ9UHQ1 456 aa24.85■■□□□ 1.57
RNF220-209ENST00000474064 ANKRD18AQ8IVF6 992 aa24.85■■□□□ 1.57
RNF220-209ENST00000474064 RTCBQ9Y3I0 505 aaKnown RBP24.85■■□□□ 1.57
RNF220-209ENST00000474064 EXOSC10Q01780 885 aaKnown RBP24.85■■□□□ 1.57
RNF220-209ENST00000474064 CDC37L1Q7L3B6 337 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms