RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 CCDC146Q8IYE0 955 aa21■□□□□ 0.95
HPS4-210ENST00000473782 MYCP01106 439 aaPredicted RBP20.99■□□□□ 0.95
HPS4-210ENST00000473782 IGKV5-2P06315 115 aa20.99■□□□□ 0.95
HPS4-210ENST00000473782 DLGAP5Q15398 846 aa20.99■□□□□ 0.95
HPS4-210ENST00000473782 SLC4A8Q2Y0W8 1093 aa20.99■□□□□ 0.95
HPS4-210ENST00000473782 CNKSR2Q8WXI2 1034 aa20.99■□□□□ 0.95
HPS4-210ENST00000473782 BRI3BPQ8WY22 251 aa20.99■□□□□ 0.95
HPS4-210ENST00000473782 PRMT6Q96LA8 375 aaPredicted RBP20.99■□□□□ 0.95
HPS4-210ENST00000473782 MBIPQ9NS73 344 aa20.99■□□□□ 0.95
HPS4-210ENST00000473782 CLRN2A0PK11 232 aa20.98■□□□□ 0.95
HPS4-210ENST00000473782 NBPF11Q86T75 865 aa20.98■□□□□ 0.95
HPS4-210ENST00000473782 SHISA4Q96DD7 197 aa20.98■□□□□ 0.95
HPS4-210ENST00000473782 CD209Q9NNX6 404 aa20.98■□□□□ 0.95
HPS4-210ENST00000473782 SPDYE2BA6NHP3 402 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 ZNF853P0CG23 659 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 SPDYE6P0CI01 402 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 SUPT20HL1Q3ZLR7 823 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 ANKRD13AQ8IZ07 590 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 SH3TC2Q8TF17 1288 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 OPTNQ96CV9 577 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 ARHGAP39Q9C0H5 1083 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 SPEF2Q9C093 1822 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 CUL9Q8IWT3 2517 aa20.97■□□□□ 0.95
HPS4-210ENST00000473782 SNAP23O00161 211 aa20.96■□□□□ 0.95
HPS4-210ENST00000473782 IREB2P48200 963 aaKnown RBP20.96■□□□□ 0.95
HPS4-210ENST00000473782 CFAP100Q494V2 611 aa20.96■□□□□ 0.95
HPS4-210ENST00000473782 SLC17A8Q8NDX2 589 aa20.96■□□□□ 0.95
HPS4-210ENST00000473782 ELP3Q9H9T3 547 aa20.96■□□□□ 0.95
HPS4-210ENST00000473782 RASA3Q14644 834 aa20.95■□□□□ 0.94
HPS4-210ENST00000473782 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.95■□□□□ 0.94
HPS4-210ENST00000473782 UBE2Q1Q7Z7E8 422 aa20.95■□□□□ 0.94
HPS4-210ENST00000473782 CDAN1Q8IWY9 1227 aa20.95■□□□□ 0.94
HPS4-210ENST00000473782 FAM43AQ8N2R8 423 aa20.95■□□□□ 0.94
HPS4-210ENST00000473782 ZSWIM8A7E2V4 1837 aa20.94■□□□□ 0.94
HPS4-210ENST00000473782 OTOFQ9HC10 1997 aa20.94■□□□□ 0.94
HPS4-210ENST00000473782 ECM29Q5VYK3 1845 aa20.93■□□□□ 0.94
HPS4-210ENST00000473782 MTFR1Q15390 333 aa20.93■□□□□ 0.94
HPS4-210ENST00000473782 TAF1CQ15572 869 aaPredicted RBP20.93■□□□□ 0.94
HPS4-210ENST00000473782 TEPSINQ96N21 525 aa20.93■□□□□ 0.94
HPS4-210ENST00000473782 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
HPS4-210ENST00000473782 F8W031 263 aaPredicted RBP20.92■□□□□ 0.94
HPS4-210ENST00000473782 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
HPS4-210ENST00000473782 VEZTQ9HBM0 779 aa20.92■□□□□ 0.94
HPS4-210ENST00000473782 ZFYVE28Q9HCC9 887 aa20.92■□□□□ 0.94
HPS4-210ENST00000473782 CCL15-CCL14A0A0B4J2E2 113 aa20.91■□□□□ 0.94
HPS4-210ENST00000473782 H7C1W4 665 aa20.91■□□□□ 0.94
HPS4-210ENST00000473782 CTGFP29279 349 aa20.91■□□□□ 0.94
HPS4-210ENST00000473782 CCL15Q16663 113 aa20.91■□□□□ 0.94
HPS4-210ENST00000473782 ANKRD2Q9GZV1 360 aa20.91■□□□□ 0.94
HPS4-210ENST00000473782 IL1R1P14778 569 aa20.9■□□□□ 0.94
HPS4-210ENST00000473782 IGHMBP2P38935 993 aaKnown RBP20.9■□□□□ 0.94
HPS4-210ENST00000473782 CHRNDQ07001 517 aa20.9■□□□□ 0.94
HPS4-210ENST00000473782 CWF19L2Q2TBE0 894 aaKnown RBP20.9■□□□□ 0.94
HPS4-210ENST00000473782 C15orf52Q6ZUT6 534 aaKnown RBP20.9■□□□□ 0.94
HPS4-210ENST00000473782 C8orf58Q8NAV2 365 aa20.9■□□□□ 0.94
HPS4-210ENST00000473782 RUNDC1Q96C34 613 aa20.9■□□□□ 0.94
HPS4-210ENST00000473782 MYH3P11055 1940 aa20.89■□□□□ 0.93
HPS4-210ENST00000473782 SOX1O00570 391 aaPredicted RBP20.89■□□□□ 0.93
HPS4-210ENST00000473782 ITGA6P23229 1130 aa20.89■□□□□ 0.93
HPS4-210ENST00000473782 FKBP1AP62942 108 aaKnown RBP20.89■□□□□ 0.93
HPS4-210ENST00000473782 LACTBP83111 547 aaPredicted RBP20.89■□□□□ 0.93
HPS4-210ENST00000473782 VGLL4Q14135 290 aa20.89■□□□□ 0.93
HPS4-210ENST00000473782 ARHGEF6Q15052 776 aa20.89■□□□□ 0.93
HPS4-210ENST00000473782 DPF3Q92784 378 aa20.89■□□□□ 0.93
HPS4-210ENST00000473782 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 NEURL1BA8MQ27 555 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 MYO1BO43795 1136 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 TLR2O60603 784 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 CSF1RP07333 972 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 GTF2A2P52657 109 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 CASP7P55210 303 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 KSR2Q6VAB6 950 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 PLA2G12BQ9BX93 195 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 JAG2Q9Y219 1238 aa20.88■□□□□ 0.93
HPS4-210ENST00000473782 TAF5LO75529 589 aa20.87■□□□□ 0.93
HPS4-210ENST00000473782 SPDYE2Q495Y8 402 aa20.87■□□□□ 0.93
HPS4-210ENST00000473782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.87■□□□□ 0.93
HPS4-210ENST00000473782 ZNF70Q9UC06 446 aaPredicted RBP20.87■□□□□ 0.93
HPS4-210ENST00000473782 DDX58O95786 925 aaKnown RBP20.86■□□□□ 0.93
HPS4-210ENST00000473782 UBE3BQ7Z3V4 1068 aa20.86■□□□□ 0.93
HPS4-210ENST00000473782 BTBD19C9JJ37 291 aa20.85■□□□□ 0.93
HPS4-210ENST00000473782 MAP3K9P80192 1104 aa20.85■□□□□ 0.93
HPS4-210ENST00000473782 HELBQ8NG08 1087 aaPredicted RBP20.85■□□□□ 0.93
HPS4-210ENST00000473782 ZBTB7BO15156 539 aaPredicted RBP20.84■□□□□ 0.93
HPS4-210ENST00000473782 GJA8P48165 433 aa20.84■□□□□ 0.93
HPS4-210ENST00000473782 TSPYL6Q8N831 410 aa20.84■□□□□ 0.93
HPS4-210ENST00000473782 LRCH3Q96II8 777 aa20.84■□□□□ 0.93
HPS4-210ENST00000473782 MPHOSPH8Q99549 860 aa20.84■□□□□ 0.93
HPS4-210ENST00000473782 TMEM39BQ9GZU3 492 aa20.84■□□□□ 0.93
HPS4-210ENST00000473782 TDRD3Q9H7E2 651 aaKnown RBP20.84■□□□□ 0.93
HPS4-210ENST00000473782 GNRH1P01148 92 aa20.83■□□□□ 0.93
HPS4-210ENST00000473782 KCNJ4P48050 445 aa20.83■□□□□ 0.93
HPS4-210ENST00000473782 C17orf99Q6UX52 265 aa20.83■□□□□ 0.93
HPS4-210ENST00000473782 IFT57Q9NWB7 429 aa20.83■□□□□ 0.93
HPS4-210ENST00000473782 ADAMTS8Q9UP79 889 aa20.83■□□□□ 0.93
HPS4-210ENST00000473782 SNCAIPQ9Y6H5 919 aa20.83■□□□□ 0.93
HPS4-210ENST00000473782 SPDYE5A6NIY4 337 aa20.82■□□□□ 0.92
HPS4-210ENST00000473782 RBM5P52756 815 aaKnown RBP eCLIP20.82■□□□□ 0.92
HPS4-210ENST00000473782 PRMT2P55345 433 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms