RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
C9orf3-214ENST00000473778 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
C9orf3-214ENST00000473778 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-214ENST00000473778 PRDM10Q9NQV6 1147 aa12.83□□□□□ -0.36
C9orf3-214ENST00000473778 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
C9orf3-214ENST00000473778 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 CIAO1O76071 339 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 FGAP02671 866 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 EVCP57679 992 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 ANTXR2P58335 489 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 PCDHA7Q9UN72 937 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-214ENST00000473778 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 PCDH11XQ9BZA7 1347 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 PCDH11YQ9BZA8 1340 aa12.82□□□□□ -0.36
C9orf3-214ENST00000473778 DMTNQ08495 405 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-214ENST00000473778 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 WDR17Q8IZU2 1322 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 MYH7P12883 1935 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 A0A1B0GVL5 298 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 USP27XA6NNY8 438 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 ZAP70P43403 619 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 ME1P48163 572 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 FSIP1Q8NA03 581 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
C9orf3-214ENST00000473778 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-214ENST00000473778 SARM1Q6SZW1 724 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-214ENST00000473778 FMR1NBQ8N0W7 255 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-214ENST00000473778 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-214ENST00000473778 DCCP43146 1447 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 KIF28PB7ZC32 967 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 CTIFO43310 598 aaKnown RBP12.8□□□□□ -0.36
C9orf3-214ENST00000473778 NDUFA8P51970 172 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 STX1AQ16623 288 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-214ENST00000473778 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 C4AP0C0L4 1744 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 C4BP0C0L5 1744 aa12.8□□□□□ -0.36
C9orf3-214ENST00000473778 COL5A2P05997 1499 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-214ENST00000473778 NAA30Q147X3 362 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-214ENST00000473778 ATP2B3Q16720 1220 aa12.79□□□□□ -0.36
C9orf3-214ENST00000473778 WASHC4Q2M389 1173 aa12.79□□□□□ -0.36
C9orf3-214ENST00000473778 LRRC8AQ8IWT6 810 aa12.79□□□□□ -0.36
C9orf3-214ENST00000473778 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
C9orf3-214ENST00000473778 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
C9orf3-214ENST00000473778 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-214ENST00000473778 LINC00301Q8NCQ3 95 aa12.79□□□□□ -0.36
C9orf3-214ENST00000473778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
C9orf3-214ENST00000473778 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
C9orf3-214ENST00000473778 KLF18A0A0U1RQI7 1052 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 PRC1O43663 620 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 KINO60870 393 aaKnown RBP12.78□□□□□ -0.36
C9orf3-214ENST00000473778 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-214ENST00000473778 CDC25BP30305 580 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 MCAMP43121 646 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 TTC39AQ5SRH9 613 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 CCDC73Q6ZRK6 1079 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 ANKRD7Q92527 254 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 AIFM3Q96NN9 605 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 RTEL1Q9NZ71 1219 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 GOLGA6L19H0YKK7 550 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 DPCR1Q3MIW9 517 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 MRFAP1L1Q96HT8 127 aa12.78□□□□□ -0.36
C9orf3-214ENST00000473778 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-214ENST00000473778 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
C9orf3-214ENST00000473778 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 CTAGE5O15320 804 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 GPAA1O43292 621 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 CAVIN2O95810 425 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 TNNT1P13805 278 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 CCDC158Q5M9N0 1113 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 ADALQ6DHV7 355 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 BRINP3Q76B58 766 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 FBXO18Q8NFZ0 1043 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 MRPS27Q92552 414 aaKnown RBP12.77□□□□□ -0.36
C9orf3-214ENST00000473778 SENP2Q9HC62 589 aa12.77□□□□□ -0.36
C9orf3-214ENST00000473778 CCZ1BP86790 482 aa12.77□□□□□ -0.37
C9orf3-214ENST00000473778 CCZ1P86791 482 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-214ENST00000473778 NCBP1Q09161 790 aaKnown RBP12.77□□□□□ -0.37
C9orf3-214ENST00000473778 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
C9orf3-214ENST00000473778 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.37
C9orf3-214ENST00000473778 ATL3Q6DD88 541 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms