RNA–Protein interactions for RNA: ENST00000473146.5

SLC6A20-206, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best)

Gene SLC6A20, Length 2,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-206ENST00000473146 CNBD1Q8NA66 436 aa15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 DNAJC2Q99543 621 aaKnown RBP15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 LIMCH1Q9UPQ0 1083 aa15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 TNRC6CQ9HCJ0 1690 aaKnown RBP15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 RUFY3Q7L099 469 aa15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 COL23A1Q86Y22 540 aaPredicted RBP15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 TSC1Q92574 1164 aa15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 PRIMPOLQ96LW4 560 aa15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 TTC14Q96N46 770 aa15.33■□□□□ 0.04
SLC6A20-206ENST00000473146 TAF5LO75529 589 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 F13A1P00488 732 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 EN1Q05925 392 aaPredicted RBP15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 GORABQ5T7V8 394 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 PRR5LQ6MZQ0 368 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 CELF1Q92879 486 aaKnown RBP15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 FSD1Q9BTV5 496 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 SNAP23O00161 211 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 KDM4AO75164 1064 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 HMGN5P82970 282 aaKnown RBP15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 EZH2Q15910 746 aaKnown RBP15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 CCDC158Q5M9N0 1113 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 GIMAP6Q6P9H5 292 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 ANKRD18AQ8IVF6 992 aa15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 LSG1Q9H089 658 aaKnown RBP15.32■□□□□ 0.04
SLC6A20-206ENST00000473146 SERPINB2P05120 415 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 IFIT1P09914 478 aaKnown RBP15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 CPA1P15085 419 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 FGFR2P21802 821 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 PUM3Q15397 648 aaKnown RBP15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 ATP6V1DQ9Y5K8 247 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 DTNBO60941 627 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 CHRNDQ07001 517 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 DDR1Q08345 913 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
SLC6A20-206ENST00000473146 CASTP20810 708 aaKnown RBP15.3■□□□□ 0.04
SLC6A20-206ENST00000473146 TTC39AQ5SRH9 613 aa15.3■□□□□ 0.04
SLC6A20-206ENST00000473146 LPIN2Q92539 896 aa15.3■□□□□ 0.04
SLC6A20-206ENST00000473146 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
SLC6A20-206ENST00000473146 CCDC94Q9BW85 323 aaPredicted RBP15.3■□□□□ 0.04
SLC6A20-206ENST00000473146 BSDC1Q9NW68 430 aaPredicted RBP15.3■□□□□ 0.04
SLC6A20-206ENST00000473146 PRDM4Q9UKN5 801 aa15.3■□□□□ 0.04
SLC6A20-206ENST00000473146 GOLIM4O00461 696 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 SCARF1Q14162 830 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 CCDC83Q8IWF9 413 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 PAG1Q9NWQ8 432 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 PNPLA7Q6ZV29 1317 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 HIP1O00291 1037 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 POLRMTO00411 1230 aaKnown RBP15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 LARGE1O95461 756 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 DNM1Q05193 864 aaKnown RBP15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 SMAP1Q8IYB5 467 aaPredicted RBP15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
SLC6A20-206ENST00000473146 GJB2P29033 226 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 RPS8P62241 208 aaKnown RBP15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 NMIQ13287 307 aaPredicted RBP15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 KBTBD3Q8NAB2 608 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 FLAD1Q8NFF5 587 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 RUFY2Q8WXA3 655 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 A0A1B0GUL6 1792 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 CHGBP05060 677 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 FKBP4Q02790 459 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 FUCA2Q9BTY2 467 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 SNRKQ9NRH2 765 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 SPTLC3Q9NUV7 552 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 MINPP1Q9UNW1 487 aa15.28■□□□□ 0.04
SLC6A20-206ENST00000473146 AKAP11Q9UKA4 1901 aa15.27■□□□□ 0.04
SLC6A20-206ENST00000473146 A0A0D9SFI3 127 aa15.27■□□□□ 0.04
SLC6A20-206ENST00000473146 PHKA1P46020 1223 aa15.27■□□□□ 0.04
SLC6A20-206ENST00000473146 CCDC102BQ68D86 513 aa15.27■□□□□ 0.04
SLC6A20-206ENST00000473146 PI16Q6UXB8 463 aa15.27■□□□□ 0.04
SLC6A20-206ENST00000473146 ZNF710Q8N1W2 664 aa15.27■□□□□ 0.04
SLC6A20-206ENST00000473146 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.04
SLC6A20-206ENST00000473146 SLC5A1P13866 664 aa15.27■□□□□ 0.03
SLC6A20-206ENST00000473146 GTF2F1P35269 517 aaKnown RBP eCLIP15.27■□□□□ 0.03
SLC6A20-206ENST00000473146 MCAMP43121 646 aa15.27■□□□□ 0.03
SLC6A20-206ENST00000473146 ST5P78524 1137 aa15.27■□□□□ 0.03
SLC6A20-206ENST00000473146 KIF3AQ9Y496 699 aa15.27■□□□□ 0.03
SLC6A20-206ENST00000473146 VPS37CA5D8V6 355 aaPredicted RBP15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 AP5Z1O43299 807 aa15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 JAKMIP1Q96N16 626 aaKnown RBP15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 PDRG1Q9NUG6 133 aa15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 MTMR6Q9Y217 621 aa15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 RFX7Q2KHR2 1363 aa15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 WTIPA6NIX2 430 aaPredicted RBP15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 ZAP70P43403 619 aa15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 SPC24Q8NBT2 197 aa15.26■□□□□ 0.03
SLC6A20-206ENST00000473146 SLC15A2Q16348 729 aa15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 CRY2Q49AN0 593 aa15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 PRPF40BQ6NWY9 871 aaKnown RBP15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 DEFB132Q7Z7B7 95 aa15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 ARID4AP29374 1257 aaPredicted RBP15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 PTH1RQ03431 593 aa15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 ADCK5Q3MIX3 580 aa15.25■□□□□ 0.03
SLC6A20-206ENST00000473146 SLFNL1Q499Z3 407 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms