RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 ZNF396Q96N95 335 aaPredicted RBP16.19■□□□□ 0.18
IFFO1-208ENST00000472558 LLPHQ9BRT6 129 aaKnown RBP16.19■□□□□ 0.18
IFFO1-208ENST00000472558 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
IFFO1-208ENST00000472558 ZNF609O15014 1411 aa16.19■□□□□ 0.18
IFFO1-208ENST00000472558 ATP8B1O43520 1251 aa16.19■□□□□ 0.18
IFFO1-208ENST00000472558 HOXC9P31274 260 aa16.19■□□□□ 0.18
IFFO1-208ENST00000472558 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
IFFO1-208ENST00000472558 CEMIPQ8WUJ3 1361 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 PARD6BQ9BYG5 372 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 RASSF4Q9H2L5 321 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 ADAM21Q9UKJ8 722 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 PRAMEF22A3QJZ6 481 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 TMEM232C9JQI7 657 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 FDPSP14324 419 aaKnown RBP16.18■□□□□ 0.18
IFFO1-208ENST00000472558 TMEM139Q8IV31 216 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 LINC00301Q8NCQ3 95 aa16.18■□□□□ 0.18
IFFO1-208ENST00000472558 SRRTQ9BXP5 876 aaKnown RBP16.18■□□□□ 0.18
IFFO1-208ENST00000472558 NLRP12P59046 1061 aa16.17■□□□□ 0.18
IFFO1-208ENST00000472558 RSRC2Q7L4I2 434 aaKnown RBP16.17■□□□□ 0.18
IFFO1-208ENST00000472558 NOP2P46087 812 aaKnown RBP16.17■□□□□ 0.18
IFFO1-208ENST00000472558 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
IFFO1-208ENST00000472558 CHST3Q7LGC8 479 aa16.17■□□□□ 0.18
IFFO1-208ENST00000472558 RTEL1Q9NZ71 1219 aa16.17■□□□□ 0.18
IFFO1-208ENST00000472558 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
IFFO1-208ENST00000472558 SLC3A2P08195 630 aaKnown RBP16.16■□□□□ 0.18
IFFO1-208ENST00000472558 PSME1Q06323 249 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 GRM8O00222 908 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 ZNF202O95125 648 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
IFFO1-208ENST00000472558 DBNLQ9UJU6 430 aaKnown RBP16.16■□□□□ 0.18
IFFO1-208ENST00000472558 LMAN1P49257 510 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 TEFQ10587 303 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
IFFO1-208ENST00000472558 SRLQ86TD4 932 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 GPR161Q8N6U8 529 aaKnown RBP16.15■□□□□ 0.18
IFFO1-208ENST00000472558 FBXO18Q8NFZ0 1043 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 PPP2R2CQ9Y2T4 447 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 UBASH3AP57075 661 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
IFFO1-208ENST00000472558 ARFGAP3Q9NP61 516 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
IFFO1-208ENST00000472558 LMTK3Q96Q04 1460 aa16.14■□□□□ 0.18
IFFO1-208ENST00000472558 NRDCO43847 1150 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 HOXB7P09629 217 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 PPP2R3AQ06190 1150 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 GPS2Q13227 327 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 ZRSR1Q15695 479 aaKnown RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 NBPF6Q5VWK0 638 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 NBPF4Q96M43 638 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 DBF4Q9UBU7 674 aaPredicted RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 KDM3BQ7LBC6 1761 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 ZNF335Q9H4Z2 1342 aaPredicted RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 DHX16O60231 1041 aaKnown RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 PDIA3P30101 505 aaKnown RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 TNNT3P45378 269 aaPredicted RBP16.14■□□□□ 0.17
IFFO1-208ENST00000472558 GNG11P61952 73 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 EPHA10Q5JZY3 1008 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 FOXR1Q6PIV2 292 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 KIFC2Q96AC6 838 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 AGXT2Q9BYV1 514 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 INTS13Q9NVM9 706 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 PIK3C2AO00443 1686 aa16.14■□□□□ 0.17
IFFO1-208ENST00000472558 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
IFFO1-208ENST00000472558 TPM1P09493 284 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 NLRP6P59044 892 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 STK38Q15208 465 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 LONRF2Q1L5Z9 754 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 GOLGA5Q8TBA6 731 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 EXOC4Q96A65 974 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
IFFO1-208ENST00000472558 RRP15Q9Y3B9 282 aaKnown RBP16.13■□□□□ 0.17
IFFO1-208ENST00000472558 MROH7-TTC4A0A0A0MT08 1334 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 CCP110O43303 1012 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
IFFO1-208ENST00000472558 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
IFFO1-208ENST00000472558 VSTM4Q8IW00 320 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 DHX58Q96C10 678 aa16.13■□□□□ 0.17
IFFO1-208ENST00000472558 IKBKBO14920 756 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 SF3A1Q15459 793 aaKnown RBP16.12■□□□□ 0.17
IFFO1-208ENST00000472558 CFAP100Q494V2 611 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 TOGARAM2Q6ZUX3 1019 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 MPHOSPH8Q99549 860 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 IRX2Q9BZI1 471 aaPredicted RBP16.12■□□□□ 0.17
IFFO1-208ENST00000472558 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 MAP2K7O14733 419 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 SPTLC2O15270 562 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 WDHD1O75717 1129 aaPredicted RBP16.12■□□□□ 0.17
IFFO1-208ENST00000472558 SERPINC1P01008 464 aa16.12■□□□□ 0.17
IFFO1-208ENST00000472558 PFKFB1P16118 471 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms