RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 MYL6BP14649 208 aa8.64□□□□□ -1.03
GTF2B-205ENST00000471471 PRKG1Q13976 671 aa8.64□□□□□ -1.03
GTF2B-205ENST00000471471 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
GTF2B-205ENST00000471471 LRP10Q7Z4F1 713 aa8.64□□□□□ -1.03
GTF2B-205ENST00000471471 TBC1D16Q8TBP0 767 aa8.64□□□□□ -1.03
GTF2B-205ENST00000471471 CCER1Q8TC90 406 aaPredicted RBP8.64□□□□□ -1.03
GTF2B-205ENST00000471471 CELF1Q92879 486 aaKnown RBP8.64□□□□□ -1.03
GTF2B-205ENST00000471471 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
GTF2B-205ENST00000471471 RRP7AQ9Y3A4 280 aaKnown RBP8.64□□□□□ -1.03
GTF2B-205ENST00000471471 NF2P35240 595 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 GJA5P36382 358 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 ARMC9Q7Z3E5 817 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 WNK4Q96J92 1243 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 CLMNQ96JQ2 1002 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 MS4A4AQ96JQ5 239 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 EYA3Q99504 573 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 STAP2Q9UGK3 403 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 ANGEL1Q9UNK9 670 aaKnown RBP8.63□□□□□ -1.03
GTF2B-205ENST00000471471 PSME4Q14997 1843 aa8.63□□□□□ -1.03
GTF2B-205ENST00000471471 ZNF646O15015 1829 aaPredicted RBP8.62□□□□□ -1.03
GTF2B-205ENST00000471471 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
GTF2B-205ENST00000471471 WNT10BO00744 389 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 RIOK3O14730 519 aaKnown RBP8.62□□□□□ -1.03
GTF2B-205ENST00000471471 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 MTFR1Q15390 333 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 MAP3K11Q16584 847 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 NLRP10Q86W26 655 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 SLC10A4Q96EP9 437 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 MIS18AQ9NYP9 233 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 NR2E3Q9Y5X4 410 aa8.62□□□□□ -1.03
GTF2B-205ENST00000471471 SSC5DA1L4H1 1573 aa8.61□□□□□ -1.03
GTF2B-205ENST00000471471 HTATIP2Q9BUP3 242 aa8.61□□□□□ -1.03
GTF2B-205ENST00000471471 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
GTF2B-205ENST00000471471 ZSWIM8A7E2V4 1837 aa8.61□□□□□ -1.03
GTF2B-205ENST00000471471 U2SURPO15042 1029 aaKnown RBP8.6□□□□□ -1.03
GTF2B-205ENST00000471471 COL9A1P20849 921 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 PRKAR2BP31323 418 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 GJA8P48165 433 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 ARHGAP39Q9C0H5 1083 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 PODXL2Q9NZ53 605 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 RAPGEFL1Q9UHV5 662 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 KNSTRNQ9Y448 316 aa8.6□□□□□ -1.03
GTF2B-205ENST00000471471 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 CDH23Q9H251 3354 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 PER1O15534 1290 aaPredicted RBP8.59□□□□□ -1.03
GTF2B-205ENST00000471471 BMP8BP34820 402 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 PDIA6Q15084 440 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 SF3B3Q15393 1217 aaKnown RBP8.59□□□□□ -1.03
GTF2B-205ENST00000471471 TAF7Q15545 349 aaPredicted RBP8.59□□□□□ -1.03
GTF2B-205ENST00000471471 LRIT3Q3SXY7 679 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 OTUD7BQ6GQQ9 843 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
GTF2B-205ENST00000471471 GDF15Q99988 308 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 THUMPD2Q9BTF0 503 aaKnown RBP8.59□□□□□ -1.03
GTF2B-205ENST00000471471 MXD3Q9BW11 206 aa8.59□□□□□ -1.03
GTF2B-205ENST00000471471 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
GTF2B-205ENST00000471471 TRMT112Q9UI30 125 aaKnown RBP8.59□□□□□ -1.03
GTF2B-205ENST00000471471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.58□□□□□ -1.04
GTF2B-205ENST00000471471 USP17L3A6NCW0 530 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 USP17L4A6NCW7 530 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 UFL1O94874 794 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 SASH1O94885 1247 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 GJB1P08034 283 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 EIF4A1P60842 406 aaKnown RBP8.58□□□□□ -1.04
GTF2B-205ENST00000471471 ARHGEF6Q15052 776 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 PROSER3Q2NL68 480 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 DACT2Q5SW24 774 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 USP17L1Q7RTZ2 530 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 RTF1Q92541 710 aaKnown RBP8.58□□□□□ -1.04
GTF2B-205ENST00000471471 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 ZBED3Q96IU2 234 aaPredicted RBP8.58□□□□□ -1.04
GTF2B-205ENST00000471471 ZFP91Q96JP5 570 aaPredicted RBP8.58□□□□□ -1.04
GTF2B-205ENST00000471471 DLG5Q8TDM6 1919 aa8.58□□□□□ -1.04
GTF2B-205ENST00000471471 UNCXA6NJT0 531 aa8.57□□□□□ -1.04
GTF2B-205ENST00000471471 EVI5O60447 810 aa8.57□□□□□ -1.04
GTF2B-205ENST00000471471 BCAMP50895 628 aa8.57□□□□□ -1.04
GTF2B-205ENST00000471471 APOBEC3FQ8IUX4 373 aaKnown RBP8.57□□□□□ -1.04
GTF2B-205ENST00000471471 BRI3BPQ8WY22 251 aa8.57□□□□□ -1.04
GTF2B-205ENST00000471471 GUCD1Q96NT3 240 aa8.57□□□□□ -1.04
GTF2B-205ENST00000471471 DEFB129Q9H1M3 183 aa8.57□□□□□ -1.04
GTF2B-205ENST00000471471 COL1A1P02452 1464 aaPredicted RBP8.57□□□□□ -1.04
GTF2B-205ENST00000471471 RPTORQ8N122 1335 aa8.56□□□□□ -1.04
GTF2B-205ENST00000471471 HTATSF1O43719 755 aaKnown RBP8.56□□□□□ -1.04
GTF2B-205ENST00000471471 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
GTF2B-205ENST00000471471 ANXA1P04083 346 aa8.56□□□□□ -1.04
GTF2B-205ENST00000471471 CCL5P13501 91 aa8.56□□□□□ -1.04
GTF2B-205ENST00000471471 CTGFP29279 349 aa8.56□□□□□ -1.04
GTF2B-205ENST00000471471 PLA2G5P39877 138 aa8.56□□□□□ -1.04
GTF2B-205ENST00000471471 RPS8P62241 208 aaKnown RBP8.56□□□□□ -1.04
GTF2B-205ENST00000471471 LACTBP83111 547 aaPredicted RBP8.56□□□□□ -1.04
GTF2B-205ENST00000471471 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
GTF2B-205ENST00000471471 GGA1Q9UJY5 639 aa8.56□□□□□ -1.04
GTF2B-205ENST00000471471 ALPK3Q96L96 1907 aa8.55□□□□□ -1.04
GTF2B-205ENST00000471471 USP2O75604 605 aaPredicted RBP8.55□□□□□ -1.04
GTF2B-205ENST00000471471 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
GTF2B-205ENST00000471471 HSP90AB3PQ58FF7 597 aa8.55□□□□□ -1.04
GTF2B-205ENST00000471471 FAM43AQ8N2R8 423 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms