RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
SMC5-202ENST00000471372 PLAURQ03405 335 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 FAAP100Q0VG06 881 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 AGMOQ6ZNB7 445 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 ZFP42Q96MM3 310 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 SLC30A3Q99726 388 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
SMC5-202ENST00000471372 SNTG2Q9NY99 539 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 PRKAG3Q9UGI9 489 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 PPT2Q9UMR5 302 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 A0A096LPE4 126 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 A0A1W2PPZ6 126 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 FAM221BA6H8Z2 402 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
SMC5-202ENST00000471372 SPEM2Q0P670 501 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 RASA3Q14644 834 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 LBRQ14739 615 aaKnown RBP9.63□□□□□ -0.87
SMC5-202ENST00000471372 RIPOR1Q6ZS17 1223 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 FAM196AQ6ZSG2 479 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 SLITRK4Q8IW52 837 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 FBXO27Q8NI29 283 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 SHDQ96IW2 340 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 RNPC3Q96LT9 517 aaKnown RBP9.63□□□□□ -0.87
SMC5-202ENST00000471372 BHLHE41Q9C0J9 482 aaPredicted RBP9.63□□□□□ -0.87
SMC5-202ENST00000471372 ZFYVE1Q9HBF4 777 aa9.63□□□□□ -0.87
SMC5-202ENST00000471372 TLR3O15455 904 aaKnown RBP9.62□□□□□ -0.87
SMC5-202ENST00000471372 MAP3K6O95382 1288 aa9.62□□□□□ -0.87
SMC5-202ENST00000471372 HOXD8P13378 290 aaPredicted RBP9.62□□□□□ -0.87
SMC5-202ENST00000471372 SEZ6Q53EL9 994 aa9.62□□□□□ -0.87
SMC5-202ENST00000471372 DHX32Q7L7V1 743 aaKnown RBP9.62□□□□□ -0.87
SMC5-202ENST00000471372 BHMTQ93088 406 aa9.62□□□□□ -0.87
SMC5-202ENST00000471372 NXPE3Q969Y0 559 aa9.62□□□□□ -0.87
SMC5-202ENST00000471372 DEPDC7Q96QD5 511 aa9.62□□□□□ -0.87
SMC5-202ENST00000471372 ZNF576Q9H609 170 aa9.62□□□□□ -0.87
SMC5-202ENST00000471372 CCDC85CA6NKD9 419 aa9.61□□□□□ -0.87
SMC5-202ENST00000471372 SMAD7O15105 426 aaKnown RBP9.61□□□□□ -0.87
SMC5-202ENST00000471372 LAMC2Q13753 1193 aa9.61□□□□□ -0.87
SMC5-202ENST00000471372 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.61□□□□□ -0.87
SMC5-202ENST00000471372 BNC2Q6ZN30 1099 aaPredicted RBP9.61□□□□□ -0.87
SMC5-202ENST00000471372 TMEM102Q8N9M5 508 aaPredicted RBP9.61□□□□□ -0.87
SMC5-202ENST00000471372 ASAP3Q8TDY4 903 aa9.61□□□□□ -0.87
SMC5-202ENST00000471372 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
SMC5-202ENST00000471372 PCDHB5Q9Y5E4 795 aa9.61□□□□□ -0.87
SMC5-202ENST00000471372 ENPP3O14638 875 aa9.6□□□□□ -0.87
SMC5-202ENST00000471372 BNIP3LO60238 219 aa9.6□□□□□ -0.87
SMC5-202ENST00000471372 F13A1P00488 732 aa9.6□□□□□ -0.87
SMC5-202ENST00000471372 ZNF157P51786 506 aaPredicted RBP9.6□□□□□ -0.87
SMC5-202ENST00000471372 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
SMC5-202ENST00000471372 TRIM42Q8IWZ5 723 aa9.6□□□□□ -0.87
SMC5-202ENST00000471372 FAM169BQ8N8A8 192 aa9.6□□□□□ -0.87
SMC5-202ENST00000471372 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
SMC5-202ENST00000471372 MARK1Q9P0L2 795 aa9.6□□□□□ -0.87
SMC5-202ENST00000471372 GPN3Q9UHW5 284 aaPredicted RBP9.6□□□□□ -0.87
SMC5-202ENST00000471372 R3HCC1Q9Y3T6 440 aaKnown RBP9.6□□□□□ -0.87
SMC5-202ENST00000471372 CD33P20138 364 aa9.59□□□□□ -0.87
SMC5-202ENST00000471372 RPS26P62854 115 aaKnown RBP9.59□□□□□ -0.87
SMC5-202ENST00000471372 ATP11AP98196 1134 aa9.59□□□□□ -0.87
SMC5-202ENST00000471372 PTPROQ16827 1216 aa9.59□□□□□ -0.87
SMC5-202ENST00000471372 CELF2-AS1Q8N7Q2 184 aa9.59□□□□□ -0.87
SMC5-202ENST00000471372 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
SMC5-202ENST00000471372 RASSF4Q9H2L5 321 aa9.59□□□□□ -0.87
SMC5-202ENST00000471372 NDFIP2Q9NV92 336 aa9.59□□□□□ -0.87
SMC5-202ENST00000471372 ZBTB42B2RXF5 422 aa9.58□□□□□ -0.88
SMC5-202ENST00000471372 J3QW42 95 aa9.58□□□□□ -0.88
SMC5-202ENST00000471372 PDE2AO00408 941 aaPredicted RBP9.58□□□□□ -0.88
SMC5-202ENST00000471372 CLSTN1O94985 981 aa9.58□□□□□ -0.88
SMC5-202ENST00000471372 MLLT1Q03111 559 aaPredicted RBP9.58□□□□□ -0.88
SMC5-202ENST00000471372 RPS26P11Q5JNZ5 115 aaPredicted RBP9.58□□□□□ -0.88
SMC5-202ENST00000471372 ABHD17AQ96GS6 310 aa9.58□□□□□ -0.88
SMC5-202ENST00000471372 MUC3BQ9H195 1237 aa9.58□□□□□ -0.88
SMC5-202ENST00000471372 KANSL2Q9H9L4 492 aa9.58□□□□□ -0.88
SMC5-202ENST00000471372 TERTO14746 1132 aaKnown RBP9.57□□□□□ -0.88
SMC5-202ENST00000471372 WIPF1O43516 503 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 NRLP54845 237 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 DBN1Q16643 649 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 KANK3Q6NY19 840 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 HFE2Q6ZVN8 426 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 JARID2Q92833 1246 aaPredicted RBP9.57□□□□□ -0.88
SMC5-202ENST00000471372 LRRC3Q9BY71 257 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 EFCC1Q9HA90 598 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 TMEM39AQ9NV64 488 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
SMC5-202ENST00000471372 LOC102724428A0A0B4J2F2 783 aa9.56□□□□□ -0.88
SMC5-202ENST00000471372 SOBPA7XYQ1 873 aa9.56□□□□□ -0.88
SMC5-202ENST00000471372 MCM4P33991 863 aa9.56□□□□□ -0.88
SMC5-202ENST00000471372 EIF6P56537 245 aaKnown RBP9.56□□□□□ -0.88
SMC5-202ENST00000471372 SIK1P57059 783 aa9.56□□□□□ -0.88
SMC5-202ENST00000471372 GATAD2BQ8WXI9 593 aa9.56□□□□□ -0.88
SMC5-202ENST00000471372 KCNB2Q92953 911 aa9.56□□□□□ -0.88
SMC5-202ENST00000471372 PBX4Q9BYU1 374 aa9.56□□□□□ -0.88
SMC5-202ENST00000471372 FAM221AA4D161 298 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 MAN1A2O60476 641 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 BMP6P22004 513 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 GIPRP48546 466 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 INSM1Q01101 510 aaPredicted RBP9.55□□□□□ -0.88
SMC5-202ENST00000471372 SEPT6Q14141 434 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 FBXW10Q5XX13 1052 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 LRP10Q7Z4F1 713 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms