RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 CCDC82Q8N4S0 544 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 TMEM57Q8N5G2 664 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 TNNQ9UQP3 1299 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 SPATA31A6Q5VVP1 1343 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 ADAMTS7Q9UKP4 1686 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 PARP4Q9UKK3 1724 aaKnown RBP7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 EXOC5O00471 708 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 TCERG1O14776 1098 aaKnown RBP7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 ADAMTS2O95450 1211 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 NCOA4Q13772 614 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 ZNF790Q6PG37 636 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 Q6ZNB5 142 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 TTC5Q8N0Z6 440 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 RWDD1Q9H446 243 aaPredicted RBP7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 MAFBQ9Y5Q3 323 aaPredicted RBP7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 ABCC4O15439 1325 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 HEG1Q9ULI3 1381 aa7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 KDM6AO15550 1401 aaPredicted RBP7.67□□□□□ -1.18
SMNDC1-204ENST00000471297 PKD1L3Q7Z443 1732 aa7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 ZBTB7BO15156 539 aaPredicted RBP7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 KCNQ3O43525 872 aa7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 MYCP01106 439 aaPredicted RBP7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 Q6ZVU0 165 aa7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 PLEKHM2Q8IWE5 1019 aa7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 DDX54Q8TDD1 881 aaKnown RBP7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 AAASQ9NRG9 546 aa7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 USP35Q9P2H5 1018 aa7.66□□□□□ -1.18
SMNDC1-204ENST00000471297 USP17L3A6NCW0 530 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 USP17L4A6NCW7 530 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 DISP2A7MBM2 1401 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 SLIT2O94813 1529 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 EIF2S2P20042 333 aaKnown RBP7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 MRC1P22897 1456 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 CCT4P50991 539 aaKnown RBP7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 SPATA31A1Q5TZJ5 1347 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 USP17L1Q7RTZ2 530 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 UNC5CLQ8IV45 518 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 CRIPAKQ8N1N5 446 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 KDM2BQ8NHM5 1336 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 FMNL2Q96PY5 1086 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 ARID3AQ99856 593 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 ZBTB40Q9NUA8 1239 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 DBF4Q9UBU7 674 aaPredicted RBP7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 MKRN1Q9UHC7 482 aaKnown RBP7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 NOD1Q9Y239 953 aa7.65□□□□□ -1.18
SMNDC1-204ENST00000471297 KDM3BQ7LBC6 1761 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 SPATA31A5Q5VU36 1347 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 SPATA31A7Q8IWB4 1347 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 ST8SIA5O15466 376 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 SNRPA1P09661 255 aaKnown RBP7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 SLC39A6Q13433 755 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 NGLY1Q96IV0 654 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 OSBPL3Q9H4L5 887 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 HYPKQ9NX55 129 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 SCN11AQ9UI33 1791 aa7.64□□□□□ -1.19
SMNDC1-204ENST00000471297 IGHDP01880 384 aa7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 FKBP5Q13451 457 aaPredicted RBP7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 HDAC1Q13547 482 aaPredicted RBP7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 VPS72Q15906 364 aa7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 G2E3Q7L622 706 aa7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 AGBL1Q96MI9 1066 aa7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 DDX21Q9NR30 783 aaKnown RBP eCLIP7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 TMOD3Q9NYL9 352 aa7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 DACH1Q9UI36 760 aa7.63□□□□□ -1.19
SMNDC1-204ENST00000471297 SIPA1L3O60292 1781 aaPredicted RBP7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 ERBB4Q15303 1308 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 NWD2Q9ULI1 1742 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 DDX58O95786 925 aaKnown RBP7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 ADH1AP07327 375 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 HSPA1LP34931 641 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 RELBQ01201 579 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 DDB1Q16531 1140 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 MEIOBQ8N635 442 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 KDF1Q8NAX2 398 aaPredicted RBP7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 ZNF496Q96IT1 587 aaPredicted RBP7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 C8orf37Q96NL8 207 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 TSEN34Q9BSV6 310 aaKnown RBP7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 TEX13AQ9BXU3 409 aaPredicted RBP7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 CHPF2Q9P2E5 772 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 CCDC9Q9Y3X0 531 aaKnown RBP7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 PCDHGA11Q9Y5H2 935 aa7.62□□□□□ -1.19
SMNDC1-204ENST00000471297 RGS12O14924 1447 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 PLCH1Q4KWH8 1693 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 UPP2O95045 317 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 GNAI3P08754 354 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 PTGIRP43119 386 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 MRPL14Q6P1L8 145 aaKnown RBP7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 SLC4A10Q6U841 1118 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 CYP2U1Q7Z449 544 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 TRIM50Q86XT4 487 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 RPAP2Q8IXW5 612 aaPredicted RBP7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 PHAXQ9H814 394 aaKnown RBP7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 ZNF395Q9H8N7 513 aaPredicted RBP7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 USP21Q9UK80 565 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 HDAC5Q9UQL6 1122 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 NRAPQ86VF7 1730 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms