RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZSWIM6Q9HCJ5 1215 aa21.68■■□□□ 1.06
SMC4-211ENST00000469858 ANKIB1Q9P2G1 1089 aa21.68■■□□□ 1.06
SMC4-211ENST00000469858 CYP46A1Q9Y6A2 500 aa21.68■■□□□ 1.06
SMC4-211ENST00000469858 MAP3K12Q12852 859 aa21.68■■□□□ 1.06
SMC4-211ENST00000469858 UBE3CQ15386 1083 aa21.68■■□□□ 1.06
SMC4-211ENST00000469858 COL1A1P02452 1464 aaPredicted RBP21.67■■□□□ 1.06
SMC4-211ENST00000469858 GPAA1O43292 621 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 PSMA5P28066 241 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 SLC15A2Q16348 729 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 CYP21A2P08686 494 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 AK2P54819 239 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 TSGA10IPQ3SY00 556 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 RUFY3Q7L099 469 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 MAGEB6Q8N7X4 407 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 PARP3Q9Y6F1 533 aa21.67■■□□□ 1.06
SMC4-211ENST00000469858 TCRBV5S4A2TA0A5A2 114 aa21.66■■□□□ 1.06
SMC4-211ENST00000469858 SF3B2Q13435 895 aaKnown RBP21.66■■□□□ 1.06
SMC4-211ENST00000469858 FBXO33Q7Z6M2 555 aa21.66■■□□□ 1.06
SMC4-211ENST00000469858 PDRG1Q9NUG6 133 aa21.66■■□□□ 1.06
SMC4-211ENST00000469858 STK32BQ9NY57 414 aa21.66■■□□□ 1.06
SMC4-211ENST00000469858 XDHP47989 1333 aa21.66■■□□□ 1.06
SMC4-211ENST00000469858 KLRG2A4D1S0 409 aaPredicted RBP21.65■■□□□ 1.06
SMC4-211ENST00000469858 HOXA10P31260 410 aaPredicted RBP21.65■■□□□ 1.06
SMC4-211ENST00000469858 BRIP1Q9BX63 1249 aa21.65■■□□□ 1.06
SMC4-211ENST00000469858 LRP2BPQ9P2M1 347 aa21.65■■□□□ 1.06
SMC4-211ENST00000469858 QSER1Q2KHR3 1735 aa21.65■■□□□ 1.06
SMC4-211ENST00000469858 FRAT2O75474 233 aaPredicted RBP21.65■■□□□ 1.06
SMC4-211ENST00000469858 HIBADHP31937 336 aaKnown RBP21.65■■□□□ 1.06
SMC4-211ENST00000469858 KRT32Q14532 448 aa21.65■■□□□ 1.06
SMC4-211ENST00000469858 BLOC1S2Q6QNY1 142 aa21.65■■□□□ 1.06
SMC4-211ENST00000469858 DENND2AQ9ULE3 1009 aa21.65■■□□□ 1.06
SMC4-211ENST00000469858 LAMA4Q16363 1823 aa21.64■■□□□ 1.06
SMC4-211ENST00000469858 FOXP2O15409 715 aa21.64■■□□□ 1.05
SMC4-211ENST00000469858 COL9A3Q14050 684 aaPredicted RBP21.64■■□□□ 1.05
SMC4-211ENST00000469858 NFKBIBQ15653 356 aa21.64■■□□□ 1.05
SMC4-211ENST00000469858 CRAMP1Q96RY5 1269 aa21.64■■□□□ 1.05
SMC4-211ENST00000469858 ABCF2Q9UG63 623 aa21.64■■□□□ 1.05
SMC4-211ENST00000469858 LEMD3Q9Y2U8 911 aa21.64■■□□□ 1.05
SMC4-211ENST00000469858 BAG6P46379 1132 aa21.63■■□□□ 1.05
SMC4-211ENST00000469858 TXNRD3Q86VQ6 643 aa21.63■■□□□ 1.05
SMC4-211ENST00000469858 ZGPATQ8N5A5 531 aaKnown RBP21.63■■□□□ 1.05
SMC4-211ENST00000469858 CIZ1Q9ULV3 898 aaPredicted RBP21.63■■□□□ 1.05
SMC4-211ENST00000469858 BBOX1O75936 387 aa21.63■■□□□ 1.05
SMC4-211ENST00000469858 LARP6Q9BRS8 491 aaKnown RBP21.63■■□□□ 1.05
SMC4-211ENST00000469858 COL11A2P13942 1736 aaPredicted RBP21.62■■□□□ 1.05
SMC4-211ENST00000469858 IRS2Q9Y4H2 1338 aa21.62■■□□□ 1.05
SMC4-211ENST00000469858 A0A0G2JLW4 131 aa21.62■■□□□ 1.05
SMC4-211ENST00000469858 SEMA3EO15041 775 aa21.62■■□□□ 1.05
SMC4-211ENST00000469858 GPSM2P81274 684 aa21.62■■□□□ 1.05
SMC4-211ENST00000469858 TTLL5Q6EMB2 1281 aa21.62■■□□□ 1.05
SMC4-211ENST00000469858 DEFB132Q7Z7B7 95 aa21.62■■□□□ 1.05
SMC4-211ENST00000469858 AIDAQ96BJ3 306 aa21.62■■□□□ 1.05
SMC4-211ENST00000469858 NSFL1CQ9UNZ2 370 aaKnown RBP21.62■■□□□ 1.05
SMC4-211ENST00000469858 RPS6KB1P23443 525 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 CUL4AQ13619 759 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 NEK1Q96PY6 1258 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 LIMCH1Q9UPQ0 1083 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 LRRC37AA6NMS7 1700 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 TCEANC2Q96MN5 208 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 RAI14Q9P0K7 980 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 CTNNA3Q9UI47 895 aa21.61■■□□□ 1.05
SMC4-211ENST00000469858 STOX1Q6ZVD7 989 aa21.6■■□□□ 1.05
SMC4-211ENST00000469858 GPR101Q96P66 508 aaPredicted RBP21.6■■□□□ 1.05
SMC4-211ENST00000469858 CACNA1SQ13698 1873 aa21.6■■□□□ 1.05
SMC4-211ENST00000469858 UFL1O94874 794 aa21.59■■□□□ 1.05
SMC4-211ENST00000469858 FGAP02671 866 aa21.59■■□□□ 1.05
SMC4-211ENST00000469858 SRGNP10124 158 aa21.59■■□□□ 1.05
SMC4-211ENST00000469858 PDE6BP35913 854 aa21.59■■□□□ 1.05
SMC4-211ENST00000469858 PPEF1O14829 653 aaPredicted RBP21.59■■□□□ 1.05
SMC4-211ENST00000469858 MBD4O95243 580 aa21.59■■□□□ 1.05
SMC4-211ENST00000469858 CHAF1AQ13111 956 aaPredicted RBP21.59■■□□□ 1.05
SMC4-211ENST00000469858 CWC22Q9HCG8 908 aaKnown RBP21.59■■□□□ 1.05
SMC4-211ENST00000469858 NPR1P16066 1061 aa21.58■■□□□ 1.05
SMC4-211ENST00000469858 HAND2P61296 217 aa21.58■■□□□ 1.05
SMC4-211ENST00000469858 IMMTQ16891 758 aaKnown RBP21.58■■□□□ 1.05
SMC4-211ENST00000469858 STRBPQ96SI9 672 aaKnown RBP21.58■■□□□ 1.05
SMC4-211ENST00000469858 GGA1Q9UJY5 639 aa21.58■■□□□ 1.05
SMC4-211ENST00000469858 PDS5AQ29RF7 1337 aaKnown RBP21.58■■□□□ 1.05
SMC4-211ENST00000469858 APPP05067 770 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 CYP7A1P22680 504 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 ATP2B4P23634 1241 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 ARMT1Q9H993 441 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 E7EWF7 191 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 TMC4Q7Z404 712 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 INTS4Q96HW7 963 aaKnown RBP21.57■■□□□ 1.04
SMC4-211ENST00000469858 LTBP1Q14766 1721 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 CCDC88AQ3V6T2 1871 aa21.57■■□□□ 1.04
SMC4-211ENST00000469858 LARGE1O95461 756 aa21.56■■□□□ 1.04
SMC4-211ENST00000469858 ZNF804AQ7Z570 1209 aa21.56■■□□□ 1.04
SMC4-211ENST00000469858 MIGA1Q8NAN2 632 aa21.56■■□□□ 1.04
SMC4-211ENST00000469858 JAG2Q9Y219 1238 aa21.56■■□□□ 1.04
SMC4-211ENST00000469858 RAB3GAP1Q15042 981 aa21.56■■□□□ 1.04
SMC4-211ENST00000469858 C15orf52Q6ZUT6 534 aaKnown RBP21.56■■□□□ 1.04
SMC4-211ENST00000469858 ADGRA1Q86SQ6 560 aa21.56■■□□□ 1.04
SMC4-211ENST00000469858 HMGB1P09429 215 aaKnown RBP21.55■■□□□ 1.04
SMC4-211ENST00000469858 ANKRD1Q15327 319 aa21.55■■□□□ 1.04
SMC4-211ENST00000469858 SP8Q8IXZ3 490 aa21.55■■□□□ 1.04
SMC4-211ENST00000469858 LCORLQ8N3X6 602 aa21.55■■□□□ 1.04
SMC4-211ENST00000469858 PODXL2Q9NZ53 605 aa21.55■■□□□ 1.04
SMC4-211ENST00000469858 MAST2Q6P0Q8 1798 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms