RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PDE8AO60658 829 aa16.29■□□□□ 0.2
GPC1-208ENST00000469694 GORABQ5T7V8 394 aa16.29■□□□□ 0.2
GPC1-208ENST00000469694 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
GPC1-208ENST00000469694 AMIGO3Q86WK7 504 aa16.29■□□□□ 0.2
GPC1-208ENST00000469694 RIPOR2Q9Y4F9 1068 aa16.29■□□□□ 0.2
GPC1-208ENST00000469694 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.29■□□□□ 0.2
GPC1-208ENST00000469694 ANKRD18BA2A2Z9 1011 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 IFIT1P09914 478 aaKnown RBP16.28■□□□□ 0.2
GPC1-208ENST00000469694 CASTP20810 708 aaKnown RBP16.28■□□□□ 0.2
GPC1-208ENST00000469694 FAM193AP78312 1265 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 GJD4Q96KN9 370 aaPredicted RBP16.28■□□□□ 0.2
GPC1-208ENST00000469694 PAG1Q9NWQ8 432 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 NRBP1Q9UHY1 535 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 TULP2O00295 520 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 CALCOCO1Q9P1Z2 691 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 DNM1Q05193 864 aaKnown RBP16.28■□□□□ 0.2
GPC1-208ENST00000469694 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
GPC1-208ENST00000469694 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
GPC1-208ENST00000469694 GPR108Q9NPR9 543 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 MRVI1Q9Y6F6 885 aa16.28■□□□□ 0.2
GPC1-208ENST00000469694 HIP1O00291 1037 aa16.27■□□□□ 0.2
GPC1-208ENST00000469694 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.2
GPC1-208ENST00000469694 MAP4K1Q92918 833 aa16.27■□□□□ 0.2
GPC1-208ENST00000469694 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.2
GPC1-208ENST00000469694 RIC1Q4ADV7 1423 aa16.27■□□□□ 0.19
GPC1-208ENST00000469694 LARGE1O95461 756 aa16.27■□□□□ 0.19
GPC1-208ENST00000469694 PDIA4P13667 645 aaKnown RBP16.27■□□□□ 0.19
GPC1-208ENST00000469694 AK2P54819 239 aa16.27■□□□□ 0.19
GPC1-208ENST00000469694 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.19
GPC1-208ENST00000469694 DRC7Q8IY82 874 aa16.27■□□□□ 0.19
GPC1-208ENST00000469694 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.19
GPC1-208ENST00000469694 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 CEP135Q66GS9 1140 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 TTC14Q96N46 770 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 SRP68Q9UHB9 627 aaKnown RBP16.26■□□□□ 0.19
GPC1-208ENST00000469694 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 TAF5LO75529 589 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 TYRO3Q06418 890 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.26■□□□□ 0.19
GPC1-208ENST00000469694 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 CCDC24Q8N4L8 307 aa16.26■□□□□ 0.19
GPC1-208ENST00000469694 RBM6P78332 1123 aaKnown RBP16.25■□□□□ 0.19
GPC1-208ENST00000469694 TTC39AQ5SRH9 613 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 NTSR2O95665 410 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 ZNF75DP51815 510 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 MAP3K11Q16584 847 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 CREBRFQ8IUR6 639 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
GPC1-208ENST00000469694 ERICH4A6NGS2 130 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 SLC27A2O14975 620 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 CAPN2P17655 700 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 CACTINQ8WUQ7 758 aaKnown RBP16.24■□□□□ 0.19
GPC1-208ENST00000469694 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
GPC1-208ENST00000469694 MTMR6Q9Y217 621 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 ANKRD36CQ5JPF3 1778 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 GNPATO15228 680 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 CCDC158Q5M9N0 1113 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 SEPT12Q8IYM1 358 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 CBX8Q9HC52 389 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
GPC1-208ENST00000469694 AKAP2Q9Y2D5 859 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 ZAP70P43403 619 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 VGLL2Q8N8G2 317 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 ZNF592Q92610 1267 aa16.24■□□□□ 0.19
GPC1-208ENST00000469694 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
GPC1-208ENST00000469694 FBXO38Q6PIJ6 1188 aa16.23■□□□□ 0.19
GPC1-208ENST00000469694 NUP62CLQ9H1M0 184 aa16.23■□□□□ 0.19
GPC1-208ENST00000469694 A0A0G2JLW4 131 aa16.23■□□□□ 0.19
GPC1-208ENST00000469694 ERFEQ4G0M1 354 aa16.23■□□□□ 0.19
GPC1-208ENST00000469694 CCDC83Q8IWF9 413 aa16.23■□□□□ 0.19
GPC1-208ENST00000469694 PDE8BO95263 885 aa16.22■□□□□ 0.19
GPC1-208ENST00000469694 ZKSCAN1P17029 563 aaPredicted RBP16.22■□□□□ 0.19
GPC1-208ENST00000469694 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
GPC1-208ENST00000469694 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
GPC1-208ENST00000469694 WTIPA6NIX2 430 aaPredicted RBP16.22■□□□□ 0.19
GPC1-208ENST00000469694 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
GPC1-208ENST00000469694 GOLGB1Q14789 3259 aaKnown RBP16.22■□□□□ 0.19
GPC1-208ENST00000469694 MCAMP43121 646 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 CAMK4Q16566 473 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 ERO1AQ96HE7 468 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 PHKA1P46020 1223 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 NECAB1Q8N987 351 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 TDRD7Q8NHU6 1098 aaKnown RBP16.21■□□□□ 0.19
GPC1-208ENST00000469694 MPHOSPH8Q99549 860 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 ST7Q9NRC1 585 aa16.21■□□□□ 0.19
GPC1-208ENST00000469694 GJB2P29033 226 aa16.2■□□□□ 0.18
GPC1-208ENST00000469694 PDRG1Q9NUG6 133 aa16.2■□□□□ 0.18
GPC1-208ENST00000469694 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.2■□□□□ 0.18
GPC1-208ENST00000469694 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
GPC1-208ENST00000469694 V9GYY5 206 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms