RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 SYT9Q86SS6 491 aa11.3□□□□□ -0.6
ITGA4-205ENST00000468948 ZSWIM4Q9H7M6 989 aa11.3□□□□□ -0.6
ITGA4-205ENST00000468948 GPR25O00155 361 aa11.29□□□□□ -0.6
ITGA4-205ENST00000468948 GREM1O60565 184 aa11.29□□□□□ -0.6
ITGA4-205ENST00000468948 GARTP22102 1010 aa11.29□□□□□ -0.6
ITGA4-205ENST00000468948 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
ITGA4-205ENST00000468948 AGMOQ6ZNB7 445 aa11.29□□□□□ -0.6
ITGA4-205ENST00000468948 GOLM1Q8NBJ4 401 aa11.29□□□□□ -0.6
ITGA4-205ENST00000468948 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
ITGA4-205ENST00000468948 MUC3BQ9H195 1237 aa11.29□□□□□ -0.6
ITGA4-205ENST00000468948 EIF2AK2P19525 551 aaKnown RBP11.28□□□□□ -0.6
ITGA4-205ENST00000468948 TFE3P19532 575 aaPredicted RBP11.28□□□□□ -0.6
ITGA4-205ENST00000468948 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
ITGA4-205ENST00000468948 CKAP2LQ8IYA6 745 aa11.28□□□□□ -0.6
ITGA4-205ENST00000468948 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
ITGA4-205ENST00000468948 OSBPL2Q9H1P3 480 aa11.28□□□□□ -0.6
ITGA4-205ENST00000468948 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
ITGA4-205ENST00000468948 UBP1Q9NZI7 540 aa11.28□□□□□ -0.6
ITGA4-205ENST00000468948 CDC14CA4D256 554 aa11.27□□□□□ -0.61
ITGA4-205ENST00000468948 PAGE1O75459 146 aa11.27□□□□□ -0.61
ITGA4-205ENST00000468948 SMNDC1O75940 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
ITGA4-205ENST00000468948 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
ITGA4-205ENST00000468948 RPS26P62854 115 aaKnown RBP11.27□□□□□ -0.61
ITGA4-205ENST00000468948 COL9A2Q14055 689 aaPredicted RBP11.27□□□□□ -0.61
ITGA4-205ENST00000468948 PCNX4Q63HM2 1172 aa11.27□□□□□ -0.61
ITGA4-205ENST00000468948 CEP135Q66GS9 1140 aa11.27□□□□□ -0.61
ITGA4-205ENST00000468948 PIF1Q9H611 641 aa11.27□□□□□ -0.61
ITGA4-205ENST00000468948 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
ITGA4-205ENST00000468948 SOX9P48436 509 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 PPP2R3AQ06190 1150 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 APOBRQ0VD83 1088 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 ZNF468Q5VIY5 522 aaPredicted RBP11.26□□□□□ -0.61
ITGA4-205ENST00000468948 VWA5B2Q8N398 1253 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 MICALL1Q8N3F8 863 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 BSNDQ8WZ55 320 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 NKD1Q969G9 470 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 ZNF408Q9H9D4 720 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 STRIP2Q9ULQ0 834 aa11.26□□□□□ -0.61
ITGA4-205ENST00000468948 TMA7Q9Y2S6 64 aaKnown RBP11.26□□□□□ -0.61
ITGA4-205ENST00000468948 BMP4P12644 408 aa11.25□□□□□ -0.61
ITGA4-205ENST00000468948 CPB1P15086 417 aa11.25□□□□□ -0.61
ITGA4-205ENST00000468948 LMNB1P20700 586 aa11.25□□□□□ -0.61
ITGA4-205ENST00000468948 FAM35AQ86V20 835 aa11.25□□□□□ -0.61
ITGA4-205ENST00000468948 CLEC4MQ9H2X3 399 aaPredicted RBP11.25□□□□□ -0.61
ITGA4-205ENST00000468948 SAMM50Q9Y512 469 aa11.25□□□□□ -0.61
ITGA4-205ENST00000468948 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
ITGA4-205ENST00000468948 C2CD2LO14523 706 aa11.24□□□□□ -0.61
ITGA4-205ENST00000468948 SIN3BO75182 1162 aa11.24□□□□□ -0.61
ITGA4-205ENST00000468948 SV2AQ7L0J3 742 aa11.24□□□□□ -0.61
ITGA4-205ENST00000468948 CPLX3Q8WVH0 158 aa11.24□□□□□ -0.61
ITGA4-205ENST00000468948 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
ITGA4-205ENST00000468948 TLDC2A0PJX2 215 aa11.23□□□□□ -0.61
ITGA4-205ENST00000468948 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
ITGA4-205ENST00000468948 ETFBP38117 255 aa11.23□□□□□ -0.61
ITGA4-205ENST00000468948 PCBP4P57723 403 aaKnown RBP11.23□□□□□ -0.61
ITGA4-205ENST00000468948 PCDH1Q08174 1060 aa11.23□□□□□ -0.61
ITGA4-205ENST00000468948 FAM196AQ6ZSG2 479 aa11.23□□□□□ -0.61
ITGA4-205ENST00000468948 PLD4Q96BZ4 506 aa11.23□□□□□ -0.61
ITGA4-205ENST00000468948 CRKP46108 304 aa11.22□□□□□ -0.61
ITGA4-205ENST00000468948 BMS1Q14692 1282 aaKnown RBP11.22□□□□□ -0.61
ITGA4-205ENST00000468948 NBPF6Q5VWK0 638 aa11.22□□□□□ -0.61
ITGA4-205ENST00000468948 TRIM42Q8IWZ5 723 aa11.22□□□□□ -0.61
ITGA4-205ENST00000468948 NBPF4Q96M43 638 aa11.22□□□□□ -0.61
ITGA4-205ENST00000468948 ROBO2Q9HCK4 1378 aa11.22□□□□□ -0.61
ITGA4-205ENST00000468948 SLC6A14Q9UN76 642 aa11.22□□□□□ -0.61
ITGA4-205ENST00000468948 PCDHB5Q9Y5E4 795 aa11.22□□□□□ -0.61
ITGA4-205ENST00000468948 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
ITGA4-205ENST00000468948 PTPRAP18433 802 aa11.21□□□□□ -0.61
ITGA4-205ENST00000468948 ZNF423Q2M1K9 1284 aa11.21□□□□□ -0.61
ITGA4-205ENST00000468948 ELMSAN1Q6PJG2 1045 aa11.21□□□□□ -0.61
ITGA4-205ENST00000468948 BNC2Q6ZN30 1099 aaPredicted RBP11.21□□□□□ -0.61
ITGA4-205ENST00000468948 SLITRK4Q8IW52 837 aa11.21□□□□□ -0.61
ITGA4-205ENST00000468948 JARID2Q92833 1246 aaPredicted RBP11.21□□□□□ -0.61
ITGA4-205ENST00000468948 MIR1-1HGQ9H1L0 117 aa11.21□□□□□ -0.61
ITGA4-205ENST00000468948 TLR3O15455 904 aaKnown RBP11.2□□□□□ -0.62
ITGA4-205ENST00000468948 F13A1P00488 732 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 BMP6P22004 513 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 NME2P22392 152 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 SEZ6Q53EL9 994 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 PERM1Q5SV97 790 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 ANKS3Q6ZW76 656 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 CCDC84Q86UT8 332 aaPredicted RBP11.2□□□□□ -0.62
ITGA4-205ENST00000468948 TNFRSF25Q93038 417 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
ITGA4-205ENST00000468948 SOX13Q9UN79 622 aa11.2□□□□□ -0.62
ITGA4-205ENST00000468948 B3GALT4O96024 378 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 VN1R5Q7Z5H4 357 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 FBXO27Q8NI29 283 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 GATAD2BQ8WXI9 593 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 ANAPC16Q96DE5 110 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 SRRTQ9BXP5 876 aaKnown RBP11.19□□□□□ -0.62
ITGA4-205ENST00000468948 LACRTQ9GZZ8 138 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 ADAM19Q9H013 955 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 AVENQ9NQS1 362 aaPredicted RBP11.19□□□□□ -0.62
ITGA4-205ENST00000468948 CYP8B1Q9UNU6 501 aa11.19□□□□□ -0.62
ITGA4-205ENST00000468948 FAM177BA6PVY3 158 aa11.18□□□□□ -0.62
ITGA4-205ENST00000468948 K7ELQ4 463 aaPredicted RBP11.18□□□□□ -0.62
ITGA4-205ENST00000468948 ADH7P40394 386 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms