RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 COL1A1P02452 1464 aaPredicted RBP8.35□□□□□ -1.07
SCAF4-204ENST00000467731 MYH7P12883 1935 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 TRIM6-TRIM34B2RNG4 842 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 FRAT2O75474 233 aaPredicted RBP8.34□□□□□ -1.07
SCAF4-204ENST00000467731 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
SCAF4-204ENST00000467731 SUPT20HQ8NEM7 779 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 HAUS7Q99871 368 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 TAOK3Q9H2K8 898 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 CD209Q9NNX6 404 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 ZNF277Q9NRM2 450 aaPredicted RBP8.34□□□□□ -1.07
SCAF4-204ENST00000467731 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
SCAF4-204ENST00000467731 SBF1O95248 1867 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 PPIP5K2O43314 1243 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 YBX3P16989 372 aaKnown RBP eCLIP8.34□□□□□ -1.072e-7■■■■□ 23.1
SCAF4-204ENST00000467731 SDSP20132 328 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 ZAP70P43403 619 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 KIAA2012Q0VF49 1180 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 SPATA5Q8NB90 893 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 RILPL2Q969X0 211 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 HMG20BQ9P0W2 317 aa8.34□□□□□ -1.07
SCAF4-204ENST00000467731 GOLIM4O00461 696 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 RASSF7Q02833 373 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 DOK7Q18PE1 504 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 ANTXR1Q9H6X2 564 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 DBNDD1Q9H9R9 158 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 PAG1Q9NWQ8 432 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 JAG2Q9Y219 1238 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 DOCK2Q92608 1830 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 COL4A5P29400 1685 aa8.34□□□□□ -1.08
SCAF4-204ENST00000467731 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
SCAF4-204ENST00000467731 IL1R1P14778 569 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 CNTROBQ8N137 903 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 TDRD7Q8NHU6 1098 aaKnown RBP8.33□□□□□ -1.08
SCAF4-204ENST00000467731 COA1Q9GZY4 146 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 G3V3G9 751 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 DCAF8Q5TAQ9 597 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 LARGE2Q8N3Y3 721 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 DENND2AQ9ULE3 1009 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 PSME4Q14997 1843 aa8.33□□□□□ -1.08
SCAF4-204ENST00000467731 DICER1Q9UPY3 1922 aaKnown RBP8.33□□□□□ -1.08
SCAF4-204ENST00000467731 ZNF646O15015 1829 aaPredicted RBP8.32□□□□□ -1.08
SCAF4-204ENST00000467731 SEMA3EO15041 775 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 ECE2O60344 883 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 IARSP41252 1262 aaKnown RBP8.32□□□□□ -1.08
SCAF4-204ENST00000467731 CHAF1AQ13111 956 aaPredicted RBP8.32□□□□□ -1.08
SCAF4-204ENST00000467731 LTBP3Q9NS15 1303 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 ARHGAP27Q6ZUM4 889 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 PODNQ7Z5L7 613 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 EVI5LQ96CN4 794 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 KCNQ5Q9NR82 932 aa8.32□□□□□ -1.08
SCAF4-204ENST00000467731 PRELPP51888 382 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 VPS33BQ9H267 617 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 YDJCA8MPS7 323 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 ZBTB22O15209 634 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 GTF2IP78347 998 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 GPR162Q16538 588 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 KBTBD3Q8NAB2 608 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 FSD1Q9BTV5 496 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 ABCF2Q9UG63 623 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 PDS5AQ29RF7 1337 aaKnown RBP8.31□□□□□ -1.08
SCAF4-204ENST00000467731 TTF1Q15361 905 aaPredicted RBP8.31□□□□□ -1.08
SCAF4-204ENST00000467731 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
SCAF4-204ENST00000467731 PIH1D3Q9NQM4 214 aaKnown RBP8.31□□□□□ -1.08
SCAF4-204ENST00000467731 IDH1O75874 414 aaKnown RBP8.3□□□□□ -1.08
SCAF4-204ENST00000467731 CHGBP05060 677 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 TTLL5Q6EMB2 1281 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
SCAF4-204ENST00000467731 NIM1KQ8IY84 436 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 WDR66Q8TBY9 1149 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 JDP2Q8WYK2 163 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 FAM205AQ6ZU69 1335 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 MYH2Q9UKX2 1941 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 PRDX5P30044 214 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 MFSD14BQ5SR56 506 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 PAXIP1Q6ZW49 1069 aaPredicted RBP8.3□□□□□ -1.08
SCAF4-204ENST00000467731 LRP2BPQ9P2M1 347 aa8.3□□□□□ -1.08
SCAF4-204ENST00000467731 SALL1Q9NSC2 1324 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 C8orf34Q49A92 452 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 ZNRF3Q9ULT6 936 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 MAST2Q6P0Q8 1798 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 TIAM2Q8IVF5 1701 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 USP17L3A6NCW0 530 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 USP17L4A6NCW7 530 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 CDC45O75419 566 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 RAD17O75943 681 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 LMNB1P20700 586 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 GRIK5Q16478 980 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 SLFNL1Q499Z3 407 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 STRIP1Q5VSL9 837 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 USP17L1Q7RTZ2 530 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 MXD3Q9BW11 206 aa8.29□□□□□ -1.08
SCAF4-204ENST00000467731 CHMLP26374 656 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 SLC9C2Q5TAH2 1124 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 ZGPATQ8N5A5 531 aaKnown RBP8.28□□□□□ -1.08
SCAF4-204ENST00000467731 CERS5Q8N5B7 392 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 TBC1D22AQ8WUA7 517 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 RAI14Q9P0K7 980 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms