RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
VPS50-209ENST00000467326 SOX13Q9UN79 622 aa6.88□□□□□ -1.31
VPS50-209ENST00000467326 A0A1W2PP55 124 aa6.87□□□□□ -1.31
VPS50-209ENST00000467326 TREHO43280 583 aa6.87□□□□□ -1.31
VPS50-209ENST00000467326 PAX4O43316 350 aa6.87□□□□□ -1.31
VPS50-209ENST00000467326 TXKP42681 527 aa6.87□□□□□ -1.31
VPS50-209ENST00000467326 ADGRE1Q14246 886 aa6.87□□□□□ -1.31
VPS50-209ENST00000467326 SND1Q7KZF4 910 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS50-209ENST00000467326 ZSCAN29Q8IWY8 852 aaPredicted RBP6.87□□□□□ -1.31
VPS50-209ENST00000467326 BSNDQ8WZ55 320 aa6.87□□□□□ -1.31
VPS50-209ENST00000467326 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
VPS50-209ENST00000467326 METTL12A8MUP2 240 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 FSCN2O14926 492 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 IGF2-ASQ6U949 168 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 CCDC74AQ96AQ1 378 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 ASB16Q96NS5 453 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 MRPL18Q9H0U6 180 aaKnown RBP6.86□□□□□ -1.31
VPS50-209ENST00000467326 LIN7BQ9HAP6 207 aa6.86□□□□□ -1.31
VPS50-209ENST00000467326 PNMA6FA0A0J9YX94 578 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 DSC3Q14574 896 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 CCNJLQ8IV13 435 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 KLHL23Q8NBE8 558 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 WNT8BQ93098 351 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 EHD4Q9H223 541 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 SEC31BQ9NQW1 1179 aa6.85□□□□□ -1.31
VPS50-209ENST00000467326 CD68P34810 354 aaPredicted RBP6.84□□□□□ -1.31
VPS50-209ENST00000467326 FMR1Q06787 632 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS50-209ENST00000467326 IKBKEQ14164 716 aa6.84□□□□□ -1.31
VPS50-209ENST00000467326 KIAA0319Q5VV43 1072 aa6.84□□□□□ -1.31
VPS50-209ENST00000467326 VN1R5Q7Z5H4 357 aa6.84□□□□□ -1.31
VPS50-209ENST00000467326 SLC7A3Q8WY07 619 aa6.84□□□□□ -1.31
VPS50-209ENST00000467326 TCF12Q99081 682 aa6.84□□□□□ -1.31
VPS50-209ENST00000467326 TM4SF5O14894 197 aa6.83□□□□□ -1.32
VPS50-209ENST00000467326 GADD45BO75293 160 aaPredicted RBP6.83□□□□□ -1.32
VPS50-209ENST00000467326 YBX3P16989 372 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS50-209ENST00000467326 ENOX2Q16206 610 aaKnown RBP6.83□□□□□ -1.32
VPS50-209ENST00000467326 AKTIPQ9H8T0 292 aa6.83□□□□□ -1.32
VPS50-209ENST00000467326 OSGEPQ9NPF4 335 aa6.83□□□□□ -1.32
VPS50-209ENST00000467326 A0A096LPE4 126 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 A0A1W2PPZ6 126 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
VPS50-209ENST00000467326 COBLO75128 1261 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 WISP1O95388 367 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 MAPK8P45983 427 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 GRIA4P48058 902 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 ARL4DP49703 201 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 C19orf57Q0VDD7 668 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 MCTP1Q6DN14 999 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 PRPF40BQ6NWY9 871 aaKnown RBP6.82□□□□□ -1.32
VPS50-209ENST00000467326 ACAD11Q709F0 780 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.82□□□□□ -1.32
VPS50-209ENST00000467326 SLC51AQ86UW1 340 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 FOXD4L4Q8WXT5 416 aaPredicted RBP6.82□□□□□ -1.32
VPS50-209ENST00000467326 TP53INP1Q96A56 240 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 TRAK1Q9UPV9 953 aa6.82□□□□□ -1.32
VPS50-209ENST00000467326 ADAM11O75078 769 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 ESRRAP11474 423 aaPredicted RBP6.81□□□□□ -1.32
VPS50-209ENST00000467326 NOS3P29474 1203 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 NLRP12P59046 1061 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 GRM2Q14416 872 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 AGGF1Q8N302 714 aaeCLIP6.81□□□□□ -1.32
VPS50-209ENST00000467326 EPS8L3Q8TE67 593 aaKnown RBP6.81□□□□□ -1.32
VPS50-209ENST00000467326 WFDC12Q8WWY7 111 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 CLEC4MQ9H2X3 399 aaPredicted RBP6.81□□□□□ -1.32
VPS50-209ENST00000467326 ABCB6Q9NP58 842 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 KCNK4Q9NYG8 393 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 RNF112Q9ULX5 631 aa6.81□□□□□ -1.32
VPS50-209ENST00000467326 IREB2P48200 963 aaKnown RBP6.8□□□□□ -1.32
VPS50-209ENST00000467326 ATP2B2Q01814 1243 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 PCDH1Q08174 1060 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 DUOXA2Q1HG44 320 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 PI16Q6UXB8 463 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 TMEM130Q8N3G9 435 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 FBF1Q8TES7 1133 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 UBASH3BQ8TF42 649 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 ZNF576Q9H609 170 aa6.8□□□□□ -1.32
VPS50-209ENST00000467326 SOX17Q9H6I2 414 aaPredicted RBP6.8□□□□□ -1.32
VPS50-209ENST00000467326 SOX1O00570 391 aaPredicted RBP6.79□□□□□ -1.32
VPS50-209ENST00000467326 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
VPS50-209ENST00000467326 ALX3O95076 343 aa6.79□□□□□ -1.32
VPS50-209ENST00000467326 P4HBP07237 508 aaKnown RBP6.79□□□□□ -1.32
VPS50-209ENST00000467326 ITPKAP23677 461 aa6.79□□□□□ -1.32
VPS50-209ENST00000467326 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
VPS50-209ENST00000467326 Q6ZS46 218 aa6.79□□□□□ -1.32
VPS50-209ENST00000467326 MEGF10Q96KG7 1140 aa6.79□□□□□ -1.32
VPS50-209ENST00000467326 ARID1BQ8NFD5 2236 aaPredicted RBP6.78□□□□□ -1.32
VPS50-209ENST00000467326 GLB1P16278 677 aa6.78□□□□□ -1.32
VPS50-209ENST00000467326 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS50-209ENST00000467326 GLIS3Q8NEA6 775 aa6.78□□□□□ -1.32
VPS50-209ENST00000467326 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
VPS50-209ENST00000467326 USP26Q9BXU7 913 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms