RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
XRN1-206ENST00000467077 SMG8Q8ND04 991 aaKnown RBP9.02□□□□□ -0.97
XRN1-206ENST00000467077 MKNK1Q9BUB5 465 aa9.02□□□□□ -0.97
XRN1-206ENST00000467077 NOVA2Q9UNW9 492 aaKnown RBP9.02□□□□□ -0.97
XRN1-206ENST00000467077 PDE2AO00408 941 aaPredicted RBP9.01□□□□□ -0.97
XRN1-206ENST00000467077 TNFRSF10BO14763 440 aa9.01□□□□□ -0.97
XRN1-206ENST00000467077 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
XRN1-206ENST00000467077 TMPRSS13Q9BYE2 586 aa9.01□□□□□ -0.97
XRN1-206ENST00000467077 ELP3Q9H9T3 547 aa9.01□□□□□ -0.97
XRN1-206ENST00000467077 SUGCTQ9HAC7 445 aa9.01□□□□□ -0.97
XRN1-206ENST00000467077 BIN1O00499 593 aa9□□□□□ -0.97
XRN1-206ENST00000467077 TIAF1O95411 115 aa9□□□□□ -0.97
XRN1-206ENST00000467077 ZAR1Q86SH2 424 aa9□□□□□ -0.97
XRN1-206ENST00000467077 FBLIM1Q8WUP2 373 aa9□□□□□ -0.97
XRN1-206ENST00000467077 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
XRN1-206ENST00000467077 PKN1Q16512 942 aa8.99□□□□□ -0.97
XRN1-206ENST00000467077 ZNF648Q5T619 568 aaPredicted RBP8.99□□□□□ -0.97
XRN1-206ENST00000467077 PAK6Q9NQU5 681 aaPredicted RBP8.99□□□□□ -0.97
XRN1-206ENST00000467077 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
XRN1-206ENST00000467077 SOX13Q9UN79 622 aa8.99□□□□□ -0.97
XRN1-206ENST00000467077 CES1P23141 567 aa8.98□□□□□ -0.97
XRN1-206ENST00000467077 IKBKEQ14164 716 aa8.98□□□□□ -0.97
XRN1-206ENST00000467077 DUSP27Q5VZP5 1158 aa8.98□□□□□ -0.97
XRN1-206ENST00000467077 KRTAP4-2Q9BYR5 136 aa8.98□□□□□ -0.97
XRN1-206ENST00000467077 STIM2Q9P246 746 aa8.98□□□□□ -0.97
XRN1-206ENST00000467077 PRKAG2Q9UGJ0 569 aa8.98□□□□□ -0.97
XRN1-206ENST00000467077 RPLP1P05386 114 aaKnown RBP8.97□□□□□ -0.97
XRN1-206ENST00000467077 ACPPP15309 386 aa8.97□□□□□ -0.97
XRN1-206ENST00000467077 NAA30Q147X3 362 aaPredicted RBP8.97□□□□□ -0.97
XRN1-206ENST00000467077 OCLNQ16625 522 aa8.97□□□□□ -0.97
XRN1-206ENST00000467077 LRRC4CQ9HCJ2 640 aa8.97□□□□□ -0.97
XRN1-206ENST00000467077 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
XRN1-206ENST00000467077 LOC100289279A0A1B0GTE1 492 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 DBX1A6NMT0 343 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 PAPLNO95428 1278 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 CYP27A1Q02318 531 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 COL19A1Q14993 1142 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 SHISA5Q8N114 240 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 NUDT16Q96DE0 195 aaKnown RBP8.96□□□□□ -0.98
XRN1-206ENST00000467077 SALL4Q9UJQ4 1053 aa8.96□□□□□ -0.98
XRN1-206ENST00000467077 FAM170BA6NMN3 283 aa8.95□□□□□ -0.98
XRN1-206ENST00000467077 ADMP35318 185 aa8.95□□□□□ -0.98
XRN1-206ENST00000467077 PLCL1Q15111 1095 aa8.95□□□□□ -0.98
XRN1-206ENST00000467077 CDCA8Q53HL2 280 aa8.95□□□□□ -0.98
XRN1-206ENST00000467077 HGSNATQ68CP4 663 aa8.95□□□□□ -0.98
XRN1-206ENST00000467077 BSNDQ8WZ55 320 aa8.95□□□□□ -0.98
XRN1-206ENST00000467077 NFKBIEO00221 500 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 SLC24A1O60721 1099 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 DRD2P14416 443 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 ZNF124Q15973 351 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 FBLN7Q53RD9 439 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 EXOSC6Q5RKV6 272 aaKnown RBP8.94□□□□□ -0.98
XRN1-206ENST00000467077 LCE4AQ5TA78 99 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 TMEM102Q8N9M5 508 aaPredicted RBP8.94□□□□□ -0.98
XRN1-206ENST00000467077 TTC16Q8NEE8 873 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 CNTN3Q9P232 1028 aa8.94□□□□□ -0.98
XRN1-206ENST00000467077 SOX1O00570 391 aaPredicted RBP8.93□□□□□ -0.98
XRN1-206ENST00000467077 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
XRN1-206ENST00000467077 PCSK2P16519 638 aa8.93□□□□□ -0.98
XRN1-206ENST00000467077 MAP7Q14244 749 aa8.93□□□□□ -0.98
XRN1-206ENST00000467077 CFAP70Q5T0N1 1121 aa8.93□□□□□ -0.98
XRN1-206ENST00000467077 C2CD4AQ8NCU7 369 aaPredicted RBP8.93□□□□□ -0.98
XRN1-206ENST00000467077 EZH1Q92800 747 aaPredicted RBP8.93□□□□□ -0.98
XRN1-206ENST00000467077 HHIPQ96QV1 700 aa8.93□□□□□ -0.98
XRN1-206ENST00000467077 SOX17Q9H6I2 414 aaPredicted RBP8.93□□□□□ -0.98
XRN1-206ENST00000467077 CXXC1Q9P0U4 656 aaPredicted RBP8.93□□□□□ -0.98
XRN1-206ENST00000467077 ZC3H7BQ9UGR2 993 aaKnown RBP8.93□□□□□ -0.98
XRN1-206ENST00000467077 SLC5A6Q9Y289 635 aa8.93□□□□□ -0.98
XRN1-206ENST00000467077 EIF4EBP3O60516 100 aaPredicted RBP8.92□□□□□ -0.98
XRN1-206ENST00000467077 TRPA1O75762 1119 aa8.92□□□□□ -0.98
XRN1-206ENST00000467077 STK11IPQ8N1F8 1099 aa8.92□□□□□ -0.98
XRN1-206ENST00000467077 C1orf127Q8N9H9 656 aa8.92□□□□□ -0.98
XRN1-206ENST00000467077 PMEPA1Q969W9 287 aa8.92□□□□□ -0.98
XRN1-206ENST00000467077 RAB6AP20340 208 aa8.91□□□□□ -0.98
XRN1-206ENST00000467077 SOX4Q06945 474 aaPredicted RBP8.91□□□□□ -0.98
XRN1-206ENST00000467077 SPOCD1Q6ZMY3 1216 aa8.91□□□□□ -0.98
XRN1-206ENST00000467077 KSR1Q8IVT5 923 aa8.91□□□□□ -0.98
XRN1-206ENST00000467077 ZBTB39O15060 712 aa8.9□□□□□ -0.98
XRN1-206ENST00000467077 ZNF792Q3KQV3 632 aa8.9□□□□□ -0.98
XRN1-206ENST00000467077 CAPN12Q6ZSI9 719 aa8.9□□□□□ -0.98
XRN1-206ENST00000467077 OSMRQ99650 979 aa8.9□□□□□ -0.98
XRN1-206ENST00000467077 ADH5P11766 374 aa8.89□□□□□ -0.99
XRN1-206ENST00000467077 ZNF765Q7L2R6 523 aa8.89□□□□□ -0.99
XRN1-206ENST00000467077 VN1R5Q7Z5H4 357 aa8.89□□□□□ -0.99
XRN1-206ENST00000467077 ASAP3Q8TDY4 903 aa8.89□□□□□ -0.99
XRN1-206ENST00000467077 SLC38A3Q99624 504 aa8.89□□□□□ -0.99
XRN1-206ENST00000467077 DLGAP3O95886 979 aa8.88□□□□□ -0.99
XRN1-206ENST00000467077 GSTM4Q03013 218 aa8.88□□□□□ -0.99
XRN1-206ENST00000467077 HP1BP3Q5SSJ5 553 aaPredicted RBP8.88□□□□□ -0.99
XRN1-206ENST00000467077 BCL7CQ8WUZ0 217 aaPredicted RBP8.88□□□□□ -0.99
XRN1-206ENST00000467077 GATA6Q92908 595 aa8.88□□□□□ -0.99
XRN1-206ENST00000467077 NXPE3Q969Y0 559 aa8.88□□□□□ -0.99
XRN1-206ENST00000467077 ZMIZ1Q9ULJ6 1067 aa8.88□□□□□ -0.99
XRN1-206ENST00000467077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.88□□□□□ -0.99
XRN1-206ENST00000467077 ELOAQ14241 798 aaKnown RBP8.87□□□□□ -0.99
XRN1-206ENST00000467077 C8orf34Q49A92 452 aa8.87□□□□□ -0.99
XRN1-206ENST00000467077 XKR5Q6UX68 686 aa8.87□□□□□ -0.99
XRN1-206ENST00000467077 ZNF574Q6ZN55 896 aaPredicted RBP8.87□□□□□ -0.99
XRN1-206ENST00000467077 ZKSCAN3Q9BRR0 538 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms