RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 GORABQ5T7V8 394 aa14.87□□□□□ -0.03
SHROOM3-202ENST00000466541 CHADLQ6NUI6 762 aa14.87□□□□□ -0.03
SHROOM3-202ENST00000466541 AGBL3Q8NEM8 1001 aa14.87□□□□□ -0.03
SHROOM3-202ENST00000466541 TDRD7Q8NHU6 1098 aaKnown RBP14.87□□□□□ -0.03
SHROOM3-202ENST00000466541 A0A1B0GUL7 405 aa14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 HMMRO75330 724 aa14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 USP50Q70EL3 339 aaPredicted RBP14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 RPAP2Q8IXW5 612 aaPredicted RBP14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 OGFOD1Q8N543 542 aa14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 XAGE2Q96GT9 111 aa14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 ZNF646O15015 1829 aaPredicted RBP14.86□□□□□ -0.03
SHROOM3-202ENST00000466541 PHKA1P46020 1223 aa14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 HIRAP54198 1017 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 IRX6P78412 446 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 FSTL1Q12841 308 aa14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 KIF4BQ2VIQ3 1234 aa14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 MFSD14BQ5SR56 506 aa14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 CERS5Q8N5B7 392 aa14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 GMLQ99445 158 aa14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 GNL3LQ9NVN8 582 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 POLR2AP24928 1970 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-202ENST00000466541 MYOZ2Q9NPC6 264 aa14.84□□□□□ -0.03
SHROOM3-202ENST00000466541 HDAC9Q9UKV0 1011 aa14.84□□□□□ -0.03
SHROOM3-202ENST00000466541 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
SHROOM3-202ENST00000466541 MYO3BQ8WXR4 1341 aa14.84□□□□□ -0.03
SHROOM3-202ENST00000466541 RBM5P52756 815 aaKnown RBP eCLIP14.83□□□□□ -0.04
SHROOM3-202ENST00000466541 CCDC102BQ68D86 513 aa14.83□□□□□ -0.04
SHROOM3-202ENST00000466541 CNTROBQ8N137 903 aa14.83□□□□□ -0.04
SHROOM3-202ENST00000466541 CCDC8Q9H0W5 538 aaPredicted RBP14.83□□□□□ -0.04
SHROOM3-202ENST00000466541 IL1RAPL2Q9NP60 686 aa14.83□□□□□ -0.04
SHROOM3-202ENST00000466541 SCAF8Q9UPN6 1271 aaKnown RBP14.83□□□□□ -0.04
SHROOM3-202ENST00000466541 ARAP2Q8WZ64 1704 aa14.83□□□□□ -0.04
SHROOM3-202ENST00000466541 ZNF280AP59817 542 aaPredicted RBP14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 SCARF1Q14162 830 aa14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 HSP90AB4PQ58FF6 505 aa14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 TNNI3KQ59H18 835 aa14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 FPGT-TNNI3KV9GXZ4 949 aa14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 ASTN2O75129 1339 aaPredicted RBP14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 FAM205AQ6ZU69 1335 aa14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 ADAMTSL1Q8N6G6 1762 aa14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 ZNF609O15014 1411 aa14.82□□□□□ -0.04
SHROOM3-202ENST00000466541 TRAF5O00463 557 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 HTRA3P83110 453 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 FMR1Q06787 632 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 GRIK5Q16478 980 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 USP48Q86UV5 1035 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 ERC1Q8IUD2 1116 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 EXOC6Q8TAG9 804 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 DBNDD2Q9BQY9 259 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 PCDHB15Q9Y5E8 787 aa14.81□□□□□ -0.04
SHROOM3-202ENST00000466541 HSPA6P17066 643 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 DLGAP5Q15398 846 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 NBPF9Q3BBW0 867 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 TTC39AQ5SRH9 613 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 DLK2Q6UY11 383 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 AACSQ86V21 672 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 RHPN1Q8TCX5 695 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 DCPSQ96C86 337 aaKnown RBP14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 GLIS2Q9BZE0 524 aaPredicted RBP14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 GGA3Q9NZ52 723 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 DENND2AQ9ULE3 1009 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 PCDHAC2Q9Y5I4 1007 aa14.8□□□□□ -0.04
SHROOM3-202ENST00000466541 SMARCA5O60264 1052 aaPredicted RBP14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 COL1A1P02452 1464 aaPredicted RBP14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 FKBP1AP62942 108 aaKnown RBP14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 RASGRF1Q13972 1273 aa14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 CFAP100Q494V2 611 aa14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 ANGEL2Q5VTE6 544 aaKnown RBP14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 TBC1D22AQ8WUA7 517 aa14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 EAF2Q96CJ1 260 aaPredicted RBP14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 ZNF408Q9H9D4 720 aa14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 TLR7Q9NYK1 1049 aaKnown RBP14.79□□□□□ -0.04
SHROOM3-202ENST00000466541 ADM5C9JUS6 153 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 ITGBL1O95965 494 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 PI16Q6UXB8 463 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 KRT26Q7Z3Y9 468 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 WDR66Q8TBY9 1149 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 ZC3H15Q8WU90 426 aaKnown RBP14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 KIF1BPQ96EK5 621 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 GPR108Q9NPR9 543 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 SNRKQ9NRH2 765 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 ABCF2Q9UG63 623 aa14.78□□□□□ -0.04
SHROOM3-202ENST00000466541 CLRN2A0PK11 232 aa14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 WNT10BO00744 389 aa14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 RAB11FIP3O75154 756 aa14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 IFIT2P09913 472 aaKnown RBP14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 APLP1P51693 650 aa14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 SULF1Q8IWU6 871 aa14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 CLASRPQ8N2M8 674 aaKnown RBP14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 DBNLQ9UJU6 430 aaKnown RBP14.77□□□□□ -0.05
SHROOM3-202ENST00000466541 SEMA3EO15041 775 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 LDHBP07195 334 aaKnown RBP14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 UQCRFS1P1P0C7P4 283 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 CRKP46108 304 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 CDC37L1Q7L3B6 337 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 SPATA5Q8NB90 893 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms