RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 GPR152Q8TDT2 470 aa8.34□□□□□ -1.07
LRCH3-211ENST00000466054 PRIMPOLQ96LW4 560 aa8.34□□□□□ -1.07
LRCH3-211ENST00000466054 YIPF2Q9BWQ6 316 aa8.34□□□□□ -1.07
LRCH3-211ENST00000466054 USP26Q9BXU7 913 aa8.34□□□□□ -1.07
LRCH3-211ENST00000466054 MEGF11A6BM72 1044 aa8.33□□□□□ -1.08
LRCH3-211ENST00000466054 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-211ENST00000466054 ZAP70P43403 619 aa8.33□□□□□ -1.08
LRCH3-211ENST00000466054 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-211ENST00000466054 TBC1D32Q96NH3 1257 aa8.33□□□□□ -1.08
LRCH3-211ENST00000466054 BIN1O00499 593 aa8.32□□□□□ -1.08
LRCH3-211ENST00000466054 RFX1P22670 979 aa8.32□□□□□ -1.08
LRCH3-211ENST00000466054 SAP130Q9H0E3 1048 aa8.32□□□□□ -1.08
LRCH3-211ENST00000466054 KANSL3Q9P2N6 904 aa8.32□□□□□ -1.08
LRCH3-211ENST00000466054 PRMT3O60678 531 aa8.31□□□□□ -1.08
LRCH3-211ENST00000466054 DUSP27Q5VZP5 1158 aa8.31□□□□□ -1.08
LRCH3-211ENST00000466054 LRRC4CQ9HCJ2 640 aa8.31□□□□□ -1.08
LRCH3-211ENST00000466054 ZNF438Q7Z4V0 828 aa8.3□□□□□ -1.08
LRCH3-211ENST00000466054 FBLIM1Q8WUP2 373 aa8.3□□□□□ -1.08
LRCH3-211ENST00000466054 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
LRCH3-211ENST00000466054 PDE2AO00408 941 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-211ENST00000466054 ZNF124Q15973 351 aa8.29□□□□□ -1.08
LRCH3-211ENST00000466054 SMG8Q8ND04 991 aaKnown RBP8.29□□□□□ -1.08
LRCH3-211ENST00000466054 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
LRCH3-211ENST00000466054 CES1P23141 567 aa8.28□□□□□ -1.08
LRCH3-211ENST00000466054 IKBKEQ14164 716 aa8.28□□□□□ -1.08
LRCH3-211ENST00000466054 PLCL1Q15111 1095 aa8.28□□□□□ -1.08
LRCH3-211ENST00000466054 ZAR1Q86SH2 424 aa8.28□□□□□ -1.08
LRCH3-211ENST00000466054 MKNK1Q9BUB5 465 aa8.28□□□□□ -1.08
LRCH3-211ENST00000466054 TMPRSS13Q9BYE2 586 aa8.28□□□□□ -1.08
LRCH3-211ENST00000466054 PAK6Q9NQU5 681 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-211ENST00000466054 CYP27A1Q02318 531 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 NAA30Q147X3 362 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-211ENST00000466054 SWI5Q1ZZU3 235 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 FBLN7Q53RD9 439 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 PDE12Q6L8Q7 609 aaKnown RBP8.27□□□□□ -1.09
LRCH3-211ENST00000466054 NFXL1Q6ZNB6 911 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 ABTB2Q8N961 1025 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 TTC16Q8NEE8 873 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 ARID3AQ99856 593 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 SUGCTQ9HAC7 445 aa8.27□□□□□ -1.09
LRCH3-211ENST00000466054 NOVA2Q9UNW9 492 aaKnown RBP8.27□□□□□ -1.09
LRCH3-211ENST00000466054 FARP2O94887 1054 aaPredicted RBP8.26□□□□□ -1.09
LRCH3-211ENST00000466054 TIAF1O95411 115 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 DRD2P14416 443 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 FAM26DQ5JW98 314 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 KSR1Q8IVT5 923 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 SHISA5Q8N114 240 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 PRKAG2Q9UGJ0 569 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 SLC5A6Q9Y289 635 aa8.26□□□□□ -1.09
LRCH3-211ENST00000466054 FAM170BA6NMN3 283 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 TNFRSF10BO14763 440 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 PAPLNO95428 1278 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 ADMP35318 185 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 COL19A1Q14993 1142 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 CDCA8Q53HL2 280 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 CDPF1Q6NVV7 123 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 STIM2Q9P246 746 aa8.25□□□□□ -1.09
LRCH3-211ENST00000466054 LOC100289279A0A1B0GTE1 492 aa8.24□□□□□ -1.09
LRCH3-211ENST00000466054 ACPPP15309 386 aa8.24□□□□□ -1.09
LRCH3-211ENST00000466054 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
LRCH3-211ENST00000466054 CFAP70Q5T0N1 1121 aa8.24□□□□□ -1.09
LRCH3-211ENST00000466054 SLC38A3Q99624 504 aa8.24□□□□□ -1.09
LRCH3-211ENST00000466054 DZANK1Q9NVP4 752 aa8.24□□□□□ -1.09
LRCH3-211ENST00000466054 SOX13Q9UN79 622 aa8.24□□□□□ -1.09
LRCH3-211ENST00000466054 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
LRCH3-211ENST00000466054 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
LRCH3-211ENST00000466054 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
LRCH3-211ENST00000466054 PCSK2P16519 638 aa8.23□□□□□ -1.09
LRCH3-211ENST00000466054 MAP7Q14244 749 aa8.23□□□□□ -1.09
LRCH3-211ENST00000466054 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
LRCH3-211ENST00000466054 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
LRCH3-211ENST00000466054 NUDT16Q96DE0 195 aaKnown RBP8.23□□□□□ -1.09
LRCH3-211ENST00000466054 CNTN3Q9P232 1028 aa8.23□□□□□ -1.09
LRCH3-211ENST00000466054 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
LRCH3-211ENST00000466054 SALL4Q9UJQ4 1053 aa8.23□□□□□ -1.09
LRCH3-211ENST00000466054 TRPA1O75762 1119 aa8.22□□□□□ -1.09
LRCH3-211ENST00000466054 RAB6AP20340 208 aa8.22□□□□□ -1.09
LRCH3-211ENST00000466054 STK11IPQ8N1F8 1099 aa8.22□□□□□ -1.09
LRCH3-211ENST00000466054 SOX1O00570 391 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-211ENST00000466054 SOX4Q06945 474 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-211ENST00000466054 ZNF792Q3KQV3 632 aa8.21□□□□□ -1.1
LRCH3-211ENST00000466054 LCE4AQ5TA78 99 aa8.21□□□□□ -1.1
LRCH3-211ENST00000466054 C2CD4AQ8NCU7 369 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-211ENST00000466054 PMEPA1Q969W9 287 aa8.21□□□□□ -1.1
LRCH3-211ENST00000466054 HHIPQ96QV1 700 aa8.21□□□□□ -1.1
LRCH3-211ENST00000466054 NFKBIEO00221 500 aa8.2□□□□□ -1.1
LRCH3-211ENST00000466054 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-211ENST00000466054 GSTM4Q03013 218 aa8.2□□□□□ -1.1
LRCH3-211ENST00000466054 OCLNQ16625 522 aa8.2□□□□□ -1.1
LRCH3-211ENST00000466054 C1orf127Q8N9H9 656 aa8.2□□□□□ -1.1
LRCH3-211ENST00000466054 TMEM102Q8N9M5 508 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-211ENST00000466054 PBXIP1Q96AQ6 731 aa8.2□□□□□ -1.1
LRCH3-211ENST00000466054 ZBTB39O15060 712 aa8.19□□□□□ -1.1
LRCH3-211ENST00000466054 SPOCD1Q6ZMY3 1216 aa8.19□□□□□ -1.1
LRCH3-211ENST00000466054 ZNF765Q7L2R6 523 aa8.19□□□□□ -1.1
LRCH3-211ENST00000466054 ASAP3Q8TDY4 903 aa8.19□□□□□ -1.1
LRCH3-211ENST00000466054 EZH1Q92800 747 aaPredicted RBP8.19□□□□□ -1.1
LRCH3-211ENST00000466054 OSMRQ99650 979 aa8.19□□□□□ -1.1
LRCH3-211ENST00000466054 NFICP08651 508 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms