RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.54□□□□□ -1.04
TPM3-214ENST00000466010 ASAP1Q9ULH1 1129 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 ITGB4P16144 1822 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 COL24A1Q17RW2 1714 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 SCAMP3O14828 347 aaKnown RBP8.53□□□□□ -1.04
TPM3-214ENST00000466010 LGR5O75473 907 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 YY1P25490 414 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 COPS2P61201 443 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 ECM1Q16610 540 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
TPM3-214ENST00000466010 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 NUDCQ9Y266 331 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 CD2APQ9Y5K6 639 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 KDM6AO15550 1401 aaPredicted RBP8.53□□□□□ -1.04
TPM3-214ENST00000466010 CNTNAP4Q9C0A0 1308 aa8.53□□□□□ -1.04
TPM3-214ENST00000466010 ESPNB1AK53 854 aa8.52□□□□□ -1.05
TPM3-214ENST00000466010 WNT2BQ93097 391 aa8.52□□□□□ -1.05
TPM3-214ENST00000466010 CITED4Q96RK1 184 aa8.52□□□□□ -1.05
TPM3-214ENST00000466010 BRPF3Q9ULD4 1205 aa8.52□□□□□ -1.05
TPM3-214ENST00000466010 RTCBQ9Y3I0 505 aaKnown RBP8.52□□□□□ -1.05
TPM3-214ENST00000466010 TAF1LQ8IZX4 1826 aa8.52□□□□□ -1.05
TPM3-214ENST00000466010 UTRNP46939 3433 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 BACH1O14867 736 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 GRIN3BO60391 1043 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 NPR3P17342 541 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 GPR162Q16538 588 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 PTCRAQ6ISU1 281 aaPredicted RBP8.51□□□□□ -1.05
TPM3-214ENST00000466010 POTEHQ6S545 545 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 NLGN1Q8N2Q7 840 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 ZNF511Q8NB15 262 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 LINC00116Q8NCU8 138 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 SLC52A2Q9HAB3 445 aa8.51□□□□□ -1.05
TPM3-214ENST00000466010 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
TPM3-214ENST00000466010 TUBGCP6Q96RT7 1819 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 HRO43593 1189 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 P4HBP07237 508 aaKnown RBP8.5□□□□□ -1.05
TPM3-214ENST00000466010 HMOX1P09601 288 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 LSM11P83369 360 aaKnown RBP eCLIP8.5□□□□□ -1.05
TPM3-214ENST00000466010 ITPK1Q13572 414 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
TPM3-214ENST00000466010 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
TPM3-214ENST00000466010 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 ALKBH2Q6NS38 261 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
TPM3-214ENST00000466010 BAP1Q92560 729 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 BACH2Q9BYV9 841 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 MRS2Q9HD23 443 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 MRC1P22897 1456 aa8.5□□□□□ -1.05
TPM3-214ENST00000466010 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
TPM3-214ENST00000466010 RPS6KA4O75676 772 aa8.49□□□□□ -1.05
TPM3-214ENST00000466010 RFC4P35249 363 aa8.49□□□□□ -1.05
TPM3-214ENST00000466010 TRMT44Q8IYL2 757 aaKnown RBP8.49□□□□□ -1.05
TPM3-214ENST00000466010 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
TPM3-214ENST00000466010 C1QTNF2Q9BXJ5 285 aa8.49□□□□□ -1.05
TPM3-214ENST00000466010 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
TPM3-214ENST00000466010 CICQ96RK0 1608 aaPredicted RBP8.49□□□□□ -1.05
TPM3-214ENST00000466010 COL3A1P02461 1466 aaPredicted RBP8.49□□□□□ -1.05
TPM3-214ENST00000466010 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
TPM3-214ENST00000466010 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 GNAT3A8MTJ3 354 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 RNMTO43148 476 aaKnown RBP8.48□□□□□ -1.05
TPM3-214ENST00000466010 ZPR1O75312 459 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 NEFMP07197 916 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 AAMPQ13685 434 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 MTHFSDQ2M296 383 aaKnown RBP8.48□□□□□ -1.05
TPM3-214ENST00000466010 MSL1Q68DK7 614 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 CAPN12Q6ZSI9 719 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 TTC5Q8N0Z6 440 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 DMRTB1Q96MA1 342 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 TEX13AQ9BXU3 409 aaPredicted RBP8.48□□□□□ -1.05
TPM3-214ENST00000466010 SLC6A16Q9GZN6 736 aa8.48□□□□□ -1.05
TPM3-214ENST00000466010 TREHO43280 583 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 TLL1O43897 1013 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 PRPF40AO75400 957 aaKnown RBP8.47□□□□□ -1.05
TPM3-214ENST00000466010 MPSTP25325 297 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 PPP2R1AP30153 589 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 CRKLP46109 303 aaKnown RBP8.47□□□□□ -1.05
TPM3-214ENST00000466010 ATP2B2Q01814 1243 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 FMR1Q06787 632 aaKnown RBP eCLIP8.47□□□□□ -1.05
TPM3-214ENST00000466010 TEFQ10587 303 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
TPM3-214ENST00000466010 PURBQ96QR8 312 aaKnown RBP8.47□□□□□ -1.05
TPM3-214ENST00000466010 PNNQ9H307 717 aaKnown RBP8.47□□□□□ -1.05
TPM3-214ENST00000466010 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 SCN11AQ9UI33 1791 aa8.47□□□□□ -1.05
TPM3-214ENST00000466010 STARD3NLO95772 234 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 LDHBP07195 334 aaKnown RBP8.46□□□□□ -1.06
TPM3-214ENST00000466010 MMP10P09238 476 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 RAB15P59190 212 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 TGFB2P61812 414 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 C16orf46Q6P387 395 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 NLGN2Q8NFZ4 835 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 PRKD2Q9BZL6 878 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 ADAMTS7Q9UKP4 1686 aa8.46□□□□□ -1.06
TPM3-214ENST00000466010 COL5A3P25940 1745 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms