RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 ADGRL1O94910 1474 aa9.69□□□□□ -0.86
SPTA1-203ENST00000465741 PSAPP07602 524 aa9.69□□□□□ -0.86
SPTA1-203ENST00000465741 TARSP26639 723 aaKnown RBP9.69□□□□□ -0.86
SPTA1-203ENST00000465741 DUSP9Q99956 384 aaKnown RBP9.69□□□□□ -0.86
SPTA1-203ENST00000465741 MRS2Q9HD23 443 aa9.69□□□□□ -0.86
SPTA1-203ENST00000465741 PRR12Q9ULL5 1215 aa9.69□□□□□ -0.86
SPTA1-203ENST00000465741 SPG7Q9UQ90 795 aa9.69□□□□□ -0.86
SPTA1-203ENST00000465741 ABCA9Q8IUA7 1624 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 ARAP3Q8WWN8 1544 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 CCDC141Q6ZP82 1450 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 MSTNO14793 375 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 VAMP1P23763 118 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 SOX18P35713 384 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 C1orf127Q8N9H9 656 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 OR13H1Q8NG92 308 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 CCDC74AQ96AQ1 378 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 SLC30A3Q99726 388 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 CHRDQ9H2X0 955 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 NLRP2Q9NX02 1062 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 PARP2Q9UGN5 583 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
SPTA1-203ENST00000465741 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
SPTA1-203ENST00000465741 KIF15Q9NS87 1388 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 MMP20O60882 483 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 BMP4P12644 408 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 GNA15P30679 374 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 PSMD2Q13200 908 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 ACDQ96AP0 544 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 TLR7Q9NYK1 1049 aaKnown RBP9.67□□□□□ -0.86
SPTA1-203ENST00000465741 CNTN3Q9P232 1028 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 HCN2Q9UL51 889 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 SAMD9LQ8IVG5 1584 aa9.67□□□□□ -0.86
SPTA1-203ENST00000465741 SYCP2Q9BX26 1530 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 NEO1Q92859 1461 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 EDN3P14138 238 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 MX2P20592 715 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 DAB2P98082 770 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 CTBSQ01459 385 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 PLAURQ03405 335 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 TMC4Q7Z404 712 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 AVENQ9NQS1 362 aaPredicted RBP9.66□□□□□ -0.86
SPTA1-203ENST00000465741 ZFATQ9P243 1243 aa9.66□□□□□ -0.86
SPTA1-203ENST00000465741 CDC42BPAQ5VT25 1732 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 PREX2Q70Z35 1606 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 GIPC1O14908 333 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 EREGO14944 169 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 SORBS3O60504 671 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 GRIN2CQ14957 1233 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 PCSK7Q16549 785 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 ZNF468Q5VIY5 522 aaPredicted RBP9.65□□□□□ -0.86
SPTA1-203ENST00000465741 USPL1Q5W0Q7 1092 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 DHX32Q7L7V1 743 aaKnown RBP9.65□□□□□ -0.86
SPTA1-203ENST00000465741 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
SPTA1-203ENST00000465741 GALNT12Q8IXK2 581 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
SPTA1-203ENST00000465741 DENND4BO75064 1496 aaPredicted RBP9.65□□□□□ -0.87
SPTA1-203ENST00000465741 TEX14Q8IWB6 1497 aa9.65□□□□□ -0.87
SPTA1-203ENST00000465741 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
SPTA1-203ENST00000465741 ITSN2Q9NZM3 1697 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 BCRP11274 1271 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 HOXD8P13378 290 aaPredicted RBP9.64□□□□□ -0.87
SPTA1-203ENST00000465741 MAP2K3P46734 347 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 HYAL2Q12891 473 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 NPHS2Q9NP85 383 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 KIAA1522Q9P206 1035 aaPredicted RBP9.64□□□□□ -0.87
SPTA1-203ENST00000465741 RTEL1-TNFRSF6BF6WH68 1400 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 ANKRD50Q9ULJ7 1429 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
SPTA1-203ENST00000465741 DHX57Q6P158 1386 aaKnown RBP9.63□□□□□ -0.87
SPTA1-203ENST00000465741 CDC42BPBQ9Y5S2 1711 aa9.63□□□□□ -0.87
SPTA1-203ENST00000465741 NRLP54845 237 aa9.63□□□□□ -0.87
SPTA1-203ENST00000465741 KANSL3Q9P2N6 904 aa9.63□□□□□ -0.87
SPTA1-203ENST00000465741 ADGRL2O95490 1459 aa9.63□□□□□ -0.87
SPTA1-203ENST00000465741 SHANK2Q9UPX8 1470 aa9.63□□□□□ -0.87
SPTA1-203ENST00000465741 DNMT1P26358 1616 aaKnown RBP9.63□□□□□ -0.87
SPTA1-203ENST00000465741 ARHGEF5Q12774 1597 aa9.63□□□□□ -0.87
SPTA1-203ENST00000465741 ABCC1P33527 1531 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 KIF3BO15066 747 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 SIN3BO75182 1162 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-203ENST00000465741 POLR3DP05423 398 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-203ENST00000465741 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPTA1-203ENST00000465741 SYT9Q86SS6 491 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 NCAPG2Q86XI2 1143 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 SPACA7Q96KW9 195 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 SRCIN1Q9C0H9 1055 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 VTI1BQ9UEU0 232 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 POGZQ7Z3K3 1410 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 NUP155O75694 1391 aa9.62□□□□□ -0.87
SPTA1-203ENST00000465741 DHX29Q7Z478 1369 aaKnown RBP9.62□□□□□ -0.87
SPTA1-203ENST00000465741 GADD45BO75293 160 aaPredicted RBP9.61□□□□□ -0.87
SPTA1-203ENST00000465741 KIF4AO95239 1232 aa9.61□□□□□ -0.87
SPTA1-203ENST00000465741 ARAFP10398 606 aa9.61□□□□□ -0.87
SPTA1-203ENST00000465741 EIF4BP23588 611 aaKnown RBP9.61□□□□□ -0.87
SPTA1-203ENST00000465741 ZEB1P37275 1124 aaPredicted RBP9.61□□□□□ -0.87
SPTA1-203ENST00000465741 GPLD1P80108 840 aa9.61□□□□□ -0.87
SPTA1-203ENST00000465741 MRPL58Q14197 206 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms