RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 SOX17Q9H6I2 414 aaPredicted RBP6.1□□□□□ -1.43
SCN3A-206ENST00000465043 C1orf115Q9H7X2 142 aa6.1□□□□□ -1.43
SCN3A-206ENST00000465043 KCNK4Q9NYG8 393 aa6.1□□□□□ -1.43
SCN3A-206ENST00000465043 AMOTL2Q9Y2J4 779 aa6.1□□□□□ -1.43
SCN3A-206ENST00000465043 HIF3AQ9Y2N7 669 aa6.1□□□□□ -1.43
SCN3A-206ENST00000465043 MEGF11A6BM72 1044 aa6.09□□□□□ -1.43
SCN3A-206ENST00000465043 FZD6O60353 706 aa6.09□□□□□ -1.43
SCN3A-206ENST00000465043 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
SCN3A-206ENST00000465043 IKBKEQ14164 716 aa6.09□□□□□ -1.43
SCN3A-206ENST00000465043 FOXD4L4Q8WXT5 416 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-206ENST00000465043 MYRFLQ96LU7 910 aa6.09□□□□□ -1.43
SCN3A-206ENST00000465043 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
SCN3A-206ENST00000465043 BHLHE41Q9C0J9 482 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-206ENST00000465043 A6NHS1 94 aa6.08□□□□□ -1.44
SCN3A-206ENST00000465043 EREGO14944 169 aa6.08□□□□□ -1.44
SCN3A-206ENST00000465043 FDX2Q6P4F2 183 aa6.08□□□□□ -1.44
SCN3A-206ENST00000465043 CLEC10AQ8IUN9 316 aa6.08□□□□□ -1.44
SCN3A-206ENST00000465043 SLC7A3Q8WY07 619 aa6.08□□□□□ -1.44
SCN3A-206ENST00000465043 RUSC1Q9BVN2 902 aa6.08□□□□□ -1.44
SCN3A-206ENST00000465043 PCMTD2Q9NV79 361 aa6.08□□□□□ -1.44
SCN3A-206ENST00000465043 ICMTO60725 284 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 ADAM11O75078 769 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 GRIK1P39086 918 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 PDE3BQ13370 1112 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 HP1BP3Q5SSJ5 553 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-206ENST00000465043 ADAMTSL4Q6UY14 1074 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-206ENST00000465043 FAM20CQ8IXL6 584 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 ARMC10Q8N2F6 343 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 UBASH3BQ8TF42 649 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 CITED4Q96RK1 184 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 DBNDD2Q9BQY9 259 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 ZFYVE1Q9HBF4 777 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 ZFYVE28Q9HCC9 887 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 BRPF3Q9ULD4 1205 aa6.07□□□□□ -1.44
SCN3A-206ENST00000465043 BTBD11A6QL63 1104 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 NDUFB5O43674 189 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 COBLO75128 1261 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 ACPPP15309 386 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 NLRP12P59046 1061 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 NFIAQ12857 509 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 NUTM2GQ5VZR2 741 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 RNF43Q68DV7 783 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 INTS5Q6P9B9 1019 aaKnown RBP6.06□□□□□ -1.44
SCN3A-206ENST00000465043 VN1R5Q7Z5H4 357 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 GLYCTKQ8IVS8 523 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 DDX54Q8TDD1 881 aaKnown RBP6.06□□□□□ -1.44
SCN3A-206ENST00000465043 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 SUGCTQ9HAC7 445 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 CYP4F12Q9HCS2 524 aa6.06□□□□□ -1.44
SCN3A-206ENST00000465043 DDX3YO15523 660 aaKnown RBP6.05□□□□□ -1.44
SCN3A-206ENST00000465043 GAS2O43903 313 aaKnown RBP6.05□□□□□ -1.44
SCN3A-206ENST00000465043 CD97P48960 835 aa6.05□□□□□ -1.44
SCN3A-206ENST00000465043 ZNF211Q13398 564 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-206ENST00000465043 GIMAP7Q8NHV1 300 aa6.05□□□□□ -1.44
SCN3A-206ENST00000465043 ASAP3Q8TDY4 903 aa6.05□□□□□ -1.44
SCN3A-206ENST00000465043 HHIPQ96QV1 700 aa6.05□□□□□ -1.44
SCN3A-206ENST00000465043 C7orf69Q9H7B7 122 aa6.05□□□□□ -1.44
SCN3A-206ENST00000465043 CCDC87Q9NVE4 849 aa6.05□□□□□ -1.44
SCN3A-206ENST00000465043 FOXD3Q9UJU5 478 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-206ENST00000465043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-206ENST00000465043 TOP2AP11388 1531 aaKnown RBP6.04□□□□□ -1.44
SCN3A-206ENST00000465043 SOX1O00570 391 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-206ENST00000465043 BMP3P12645 472 aa6.04□□□□□ -1.44
SCN3A-206ENST00000465043 BEND4Q6ZU67 534 aa6.04□□□□□ -1.44
SCN3A-206ENST00000465043 GALNT12Q8IXK2 581 aa6.04□□□□□ -1.44
SCN3A-206ENST00000465043 SMG8Q8ND04 991 aaKnown RBP6.04□□□□□ -1.44
SCN3A-206ENST00000465043 KCNF1Q9H3M0 494 aa6.04□□□□□ -1.44
SCN3A-206ENST00000465043 ANO2Q9NQ90 1003 aa6.04□□□□□ -1.44
SCN3A-206ENST00000465043 ATAD2BQ9ULI0 1458 aa6.03□□□□□ -1.44
SCN3A-206ENST00000465043 EIF4G1Q04637 1599 aaKnown RBP6.03□□□□□ -1.44
SCN3A-206ENST00000465043 H3BRB1 525 aa6.03□□□□□ -1.44
SCN3A-206ENST00000465043 TRPA1O75762 1119 aa6.03□□□□□ -1.44
SCN3A-206ENST00000465043 ESRRAP11474 423 aaPredicted RBP6.03□□□□□ -1.44
SCN3A-206ENST00000465043 PREPP48147 710 aa6.03□□□□□ -1.44
SCN3A-206ENST00000465043 CPSF6Q16630 551 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCN3A-206ENST00000465043 PEAR1Q5VY43 1037 aaPredicted RBP6.03□□□□□ -1.44
SCN3A-206ENST00000465043 TRIM42Q8IWZ5 723 aa6.03□□□□□ -1.44
SCN3A-206ENST00000465043 USP26Q9BXU7 913 aa6.03□□□□□ -1.44
SCN3A-206ENST00000465043 TMPRSS13Q9BYE2 586 aa6.03□□□□□ -1.44
SCN3A-206ENST00000465043 TUT1Q9H6E5 874 aaKnown RBP6.03□□□□□ -1.44
SCN3A-206ENST00000465043 CCDC88BA6NC98 1476 aa6.02□□□□□ -1.44
SCN3A-206ENST00000465043 LOC100289279A0A1B0GTE1 492 aa6.02□□□□□ -1.45
SCN3A-206ENST00000465043 KIAA1324LA8MWY0 1029 aaPredicted RBP6.02□□□□□ -1.45
SCN3A-206ENST00000465043 CYP11A1P05108 521 aa6.02□□□□□ -1.45
SCN3A-206ENST00000465043 SSTR4P31391 388 aa6.02□□□□□ -1.45
SCN3A-206ENST00000465043 EXOSC6Q5RKV6 272 aaKnown RBP6.02□□□□□ -1.45
SCN3A-206ENST00000465043 ZDHHC13Q8IUH4 622 aa6.02□□□□□ -1.45
SCN3A-206ENST00000465043 CCNJLQ8IV13 435 aa6.02□□□□□ -1.45
SCN3A-206ENST00000465043 C12orf50Q8NA57 414 aaPredicted RBP6.02□□□□□ -1.45
SCN3A-206ENST00000465043 YIPF2Q9BWQ6 316 aa6.02□□□□□ -1.45
SCN3A-206ENST00000465043 CLEC4MQ9H2X3 399 aaPredicted RBP6.02□□□□□ -1.45
SCN3A-206ENST00000465043 A0A096LPE4 126 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 A0A1W2PP55 124 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 A0A1W2PPZ6 126 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 HMX2A2RU54 273 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 TIAF1O95411 115 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 GSTM4Q03013 218 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 CCER1Q8TC90 406 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms