RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 GPT2Q8TD30 523 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 LRRC2Q9BYS8 371 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
ATF3-207ENST00000464547 MYH7P12883 1935 aa11.66□□□□□ -0.54
ATF3-207ENST00000464547 LAMA4Q16363 1823 aa11.66□□□□□ -0.54
ATF3-207ENST00000464547 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
ATF3-207ENST00000464547 STK3Q13188 491 aa11.66□□□□□ -0.54
ATF3-207ENST00000464547 IMMTQ16891 758 aaKnown RBP11.66□□□□□ -0.54
ATF3-207ENST00000464547 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
ATF3-207ENST00000464547 GTF3C6Q969F1 213 aa11.66□□□□□ -0.54
ATF3-207ENST00000464547 AGXT2Q9BYV1 514 aa11.66□□□□□ -0.54
ATF3-207ENST00000464547 BSDC1Q9NW68 430 aaPredicted RBP11.66□□□□□ -0.54
ATF3-207ENST00000464547 TAF1LQ8IZX4 1826 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 PFKFB2O60825 505 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 HAND2P61296 217 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 FOXD4L6Q3SYB3 417 aaPredicted RBP11.65□□□□□ -0.54
ATF3-207ENST00000464547 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 FOXD4L3Q6VB84 417 aaPredicted RBP11.65□□□□□ -0.54
ATF3-207ENST00000464547 FAM196AQ6ZSG2 479 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 TMEM87AQ8NBN3 555 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.54
ATF3-207ENST00000464547 BRF1Q92994 677 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 QTRT2Q9H974 415 aaKnown RBP11.65□□□□□ -0.54
ATF3-207ENST00000464547 MINPP1Q9UNW1 487 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 C4BP0C0L5 1744 aa11.65□□□□□ -0.54
ATF3-207ENST00000464547 XRCC6P12956 609 aaKnown RBP eCLIP11.64□□□□□ -0.55
ATF3-207ENST00000464547 FGD1P98174 961 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 MAP3K12Q12852 859 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 UBE4AQ14139 1066 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 LARP1BQ659C4 914 aaKnown RBP11.64□□□□□ -0.55
ATF3-207ENST00000464547 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 USP48Q86UV5 1035 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 GAS2L3Q86XJ1 694 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
ATF3-207ENST00000464547 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 MAGEB6Q8N7X4 407 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 NLRP3Q96P20 1036 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 STRBPQ96SI9 672 aaKnown RBP11.64□□□□□ -0.55
ATF3-207ENST00000464547 LRRC4BQ9NT99 713 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 ISY1Q9ULR0 285 aaKnown RBP11.64□□□□□ -0.55
ATF3-207ENST00000464547 NSFL1CQ9UNZ2 370 aaKnown RBP11.64□□□□□ -0.55
ATF3-207ENST00000464547 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
ATF3-207ENST00000464547 ZNF804BA4D1E1 1349 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 VPS37CA5D8V6 355 aaPredicted RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 WTIPA6NIX2 430 aaPredicted RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 ZNF213O14771 459 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 JAK2O60674 1132 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 PHF14O94880 888 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 MBD3O95983 291 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 PDCP20941 246 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 RFC4P35249 363 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 GYG1P46976 350 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 ZNF445P59923 1031 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 SCRN1Q12765 414 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 ALX1Q15699 326 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 CAVIN1Q6NZI2 390 aaKnown RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 CHST3Q7LGC8 479 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 FBXL16Q8N461 479 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 SMARCC2Q8TAQ2 1214 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 LLPHQ9BRT6 129 aaKnown RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 GDPD2Q9HCC8 539 aa11.63□□□□□ -0.55
ATF3-207ENST00000464547 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 MYO5AQ9Y4I1 1855 aaKnown RBP11.63□□□□□ -0.55
ATF3-207ENST00000464547 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
ATF3-207ENST00000464547 MBD4O95243 580 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 TM4SF1P30408 202 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 MRE11P49959 708 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 ANTXR2P58335 489 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 NFIXQ14938 502 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 ZSCAN23Q3MJ62 389 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 NCOA7Q8NI08 942 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 AIDAQ96BJ3 306 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 ZNF274Q96GC6 653 aaPredicted RBP11.62□□□□□ -0.55
ATF3-207ENST00000464547 ARMT1Q9H993 441 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 GRPEL1Q9HAV7 217 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 ATP6V1DQ9Y5K8 247 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 C4AP0C0L4 1744 aa11.62□□□□□ -0.55
ATF3-207ENST00000464547 WDR19Q8NEZ3 1342 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 TAF1P21675 1872 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 PATL2C9JE40 543 aaKnown RBP11.61□□□□□ -0.55
ATF3-207ENST00000464547 PRC1O43663 620 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 CTDNEP1O95476 244 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 APPP05067 770 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 PDIA3P30101 505 aaKnown RBP11.61□□□□□ -0.55
ATF3-207ENST00000464547 MCM5P33992 734 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 EVCP57679 992 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 CDC37L1Q7L3B6 337 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 FBXO33Q7Z6M2 555 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 TBC1D10CQ8IV04 446 aa11.61□□□□□ -0.55
ATF3-207ENST00000464547 FAM84BQ96KN1 310 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms