RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.04
CHRNA4-202ENST00000463705 GNA11P29992 359 aa15.33■□□□□ 0.04
CHRNA4-202ENST00000463705 APOBRQ0VD83 1088 aa15.33■□□□□ 0.04
CHRNA4-202ENST00000463705 PRIMPOLQ96LW4 560 aa15.33■□□□□ 0.04
CHRNA4-202ENST00000463705 PICALMQ13492 652 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 SMARCC2Q8TAQ2 1214 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 TRAPPC3LQ5T215 181 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 CYLC1P35663 651 aaPredicted RBP15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 CCDC174Q6PII3 467 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 SYNMO15061 1565 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 CHST3Q7LGC8 479 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 FBXO3Q9UK99 471 aa15.32■□□□□ 0.04
CHRNA4-202ENST00000463705 ITGA6P23229 1130 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 LLPHQ9BRT6 129 aaKnown RBP15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 TBC1D5Q92609 795 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 B4DLN1 442 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 MYZAPP0CAP1 466 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 CCDC91Q7Z6B0 441 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 FERMT2Q96AC1 680 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 AFMP43652 599 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
CHRNA4-202ENST00000463705 BICDL2A1A5D9 508 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 MARCKSP29966 332 aaPredicted RBP15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 SHTN1A0MZ66 631 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 CKAP4Q07065 602 aaKnown RBP15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 PNMA6EA0A0J9YXQ4 647 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 F8W031 263 aaPredicted RBP15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 MBD4O95243 580 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 PRIM1P49642 420 aaKnown RBP15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 FAM89AQ96GI7 184 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 TFCP2L1Q9NZI6 479 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 SYT1P21579 422 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 TIMM10P62072 90 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 KRT79Q5XKE5 535 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 EFCAB6Q5THR3 1501 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 MAGI2Q86UL8 1455 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 GNPATO15228 680 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 KRT13P13646 458 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 ASIC1P78348 528 aa15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
CHRNA4-202ENST00000463705 USP8P40818 1118 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 EIF4A1P60842 406 aaKnown RBP15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 CNBD1Q8NA66 436 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 APPBP2Q92624 585 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 MAST3O60307 1309 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 SPDYE3A6NKU9 549 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 DNAJC25Q9H1X3 360 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 SHROOM2Q13796 1616 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 AATKQ6ZMQ8 1374 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 ATP7BP35670 1465 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 IFFO1Q0D2I5 559 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 TTC37Q6PGP7 1564 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 BICD1Q96G01 975 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
CHRNA4-202ENST00000463705 PLEKHG1Q9ULL1 1385 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 SLC27A2O14975 620 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 SGSM2O43147 1006 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 CPA1P15085 419 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 TYRO3Q06418 890 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 AOPEPQ8N6M6 819 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 KDM6BO15054 1643 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 MROH5Q6ZUA9 1318 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 AKR1B10O60218 316 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 LIG1P18858 919 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 PPP1R2P41236 205 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 SUCLG2Q96I99 432 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 ABCC4O15439 1325 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 XAGE2Q96GT9 111 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 POLD1P28340 1107 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 LTKP29376 864 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 GCKRQ14397 625 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 KLHDC4Q8TBB5 520 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 DHX58Q96C10 678 aa15.28■□□□□ 0.04
CHRNA4-202ENST00000463705 PARP1P09874 1014 aaKnown RBP15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 PLVAPQ9BX97 442 aa15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 GSTTP1A0A1W2PQM5 241 aa15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 HIBADHP31937 336 aaKnown RBP15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 GNG11P61952 73 aa15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 DYDC1Q8WWB3 177 aa15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 DDX12PQ92771 950 aa15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.04
CHRNA4-202ENST00000463705 HOOK3Q86VS8 718 aa15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 SPAG5Q96R06 1193 aa15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 SNX14Q9Y5W7 946 aa15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 MLH3Q9UHC1 1453 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms