RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 SOX18P35713 384 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 PLA2G4EQ3MJ16 856 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 RASGRP4Q8TDF6 673 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 NXPE3Q969Y0 559 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 DCAF5Q96JK2 942 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 SPACA7Q96KW9 195 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 HIRIP3Q9BW71 556 aaPredicted RBP6.88□□□□□ -1.31
VRK2-208ENST00000463222 PIF1Q9H611 641 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 EFR3BQ9Y2G0 817 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 A0A096LPE4 126 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 LOC102724428A0A0B4J2F2 783 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 A0A1W2PPZ6 126 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 MSTNO14793 375 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 SSBP05455 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
VRK2-208ENST00000463222 BCRP11274 1271 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 NASPP49321 788 aaPredicted RBP6.87□□□□□ -1.31
VRK2-208ENST00000463222 ZNF157P51786 506 aaPredicted RBP6.87□□□□□ -1.31
VRK2-208ENST00000463222 SIK1P57059 783 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 ATP11AP98196 1134 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 PODNQ7Z5L7 613 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 NOP9Q86U38 636 aaKnown RBP6.87□□□□□ -1.31
VRK2-208ENST00000463222 PHC3Q8NDX5 983 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 RASSF4Q9H2L5 321 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 SEC31BQ9NQW1 1179 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 GINM1Q9NU53 330 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 MRVI1Q9Y6F6 885 aa6.87□□□□□ -1.31
VRK2-208ENST00000463222 PDE2AO00408 941 aaPredicted RBP6.86□□□□□ -1.31
VRK2-208ENST00000463222 LIG3P49916 1009 aa6.86□□□□□ -1.31
VRK2-208ENST00000463222 CTBSQ01459 385 aa6.86□□□□□ -1.31
VRK2-208ENST00000463222 FAAP100Q0VG06 881 aa6.86□□□□□ -1.31
VRK2-208ENST00000463222 BEND7Q8N7W2 519 aaPredicted RBP6.86□□□□□ -1.31
VRK2-208ENST00000463222 TMEM102Q8N9M5 508 aaPredicted RBP6.86□□□□□ -1.31
VRK2-208ENST00000463222 ANKRD24Q8TF21 1146 aa6.86□□□□□ -1.31
VRK2-208ENST00000463222 SEC16BQ96JE7 1060 aa6.86□□□□□ -1.31
VRK2-208ENST00000463222 NECAB3Q96P71 396 aaPredicted RBP6.86□□□□□ -1.31
VRK2-208ENST00000463222 SPOCK3Q9BQ16 436 aa6.86□□□□□ -1.31
VRK2-208ENST00000463222 CEP44Q9C0F1 390 aa6.86□□□□□ -1.31
VRK2-208ENST00000463222 GPR25O00155 361 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 ADAM23O75077 832 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 PAGE1O75459 146 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 ITGB2P05107 769 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 RLBP1P12271 317 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 HOXD8P13378 290 aaPredicted RBP6.85□□□□□ -1.31
VRK2-208ENST00000463222 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
VRK2-208ENST00000463222 GARTP22102 1010 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 FGFR3P22607 806 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 ITPKAP23677 461 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 NRLP54845 237 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 CAMK2GQ13555 558 aaPredicted RBP6.85□□□□□ -1.31
VRK2-208ENST00000463222 SNAP47Q5SQN1 464 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 SOGA3Q5TF21 947 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 TTBK2Q6IQ55 1244 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 GOLM1Q8NBJ4 401 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 RHOVQ96L33 236 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 TRERF1Q96PN7 1200 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 PBX4Q9BYU1 374 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 EFCC1Q9HA90 598 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 ZFYVE1Q9HBF4 777 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 UBP1Q9NZI7 540 aa6.85□□□□□ -1.31
VRK2-208ENST00000463222 ATXN7L1Q9ULK2 861 aaPredicted RBP6.85□□□□□ -1.31
VRK2-208ENST00000463222 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 ENC1O14682 589 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 PROCP04070 461 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
VRK2-208ENST00000463222 ETFBP38117 255 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 BMS1Q14692 1282 aaKnown RBP6.84□□□□□ -1.31
VRK2-208ENST00000463222 ACDQ96AP0 544 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 NT5C1AQ9BXI3 368 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
VRK2-208ENST00000463222 MUC3BQ9H195 1237 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 OSBPL2Q9H1P3 480 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 ZNF408Q9H9D4 720 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
VRK2-208ENST00000463222 PRR12Q9ULL5 1215 aa6.84□□□□□ -1.31
VRK2-208ENST00000463222 NSFL1CQ9UNZ2 370 aaKnown RBP6.84□□□□□ -1.31
VRK2-208ENST00000463222 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
VRK2-208ENST00000463222 TLDC2A0PJX2 215 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 GREM1O60565 184 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 GHRHP01286 108 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 HMGB1P09429 215 aaKnown RBP6.83□□□□□ -1.32
VRK2-208ENST00000463222 CANXP27824 592 aaKnown RBP6.83□□□□□ -1.32
VRK2-208ENST00000463222 GPLD1P80108 840 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 LMNB2Q03252 620 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 NEUROD1Q13562 356 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 NEDD1Q8NHV4 660 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 TRPM4Q8TD43 1214 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 NKD1Q969G9 470 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 POP1Q99575 1024 aaKnown RBP6.83□□□□□ -1.32
VRK2-208ENST00000463222 ZNF576Q9H609 170 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
VRK2-208ENST00000463222 PCDHB5Q9Y5E4 795 aa6.83□□□□□ -1.32
VRK2-208ENST00000463222 TLR3O15455 904 aaKnown RBP6.82□□□□□ -1.32
VRK2-208ENST00000463222 CRKP46108 304 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 PCNX4Q63HM2 1172 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 CEP135Q66GS9 1140 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 AGMOQ6ZNB7 445 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms