RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 FAM196AQ6ZSG2 479 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 TRIM46Q7Z4K8 759 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 FBXO27Q8NI29 283 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 JARID2Q92833 1246 aaPredicted RBP5.5□□□□□ -1.53
GPNMB-205ENST00000463011 BHMTQ93088 406 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 NXPE3Q969Y0 559 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 SHDQ96IW2 340 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 ZFP42Q96MM3 310 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 DEPDC7Q96QD5 511 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 SLC30A3Q99726 388 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 GPN3Q9UHW5 284 aaPredicted RBP5.5□□□□□ -1.53
GPNMB-205ENST00000463011 PPT2Q9UMR5 302 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 PCDHB5Q9Y5E4 795 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 SENP3-EIF4A1A0A087X0R7 540 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 J3QW42 95 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 NFKBIEO00221 500 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 F13A1P00488 732 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 LMNB1P20700 586 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 MCM4P33991 863 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 IGBP1P78318 339 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 FAAP100Q0VG06 881 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 LBRQ14739 615 aaKnown RBP5.49□□□□□ -1.53
GPNMB-205ENST00000463011 RNF187Q5TA31 235 aaPredicted RBP5.49□□□□□ -1.53
GPNMB-205ENST00000463011 FBXW10Q5XX13 1052 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 DHX32Q7L7V1 743 aaKnown RBP5.49□□□□□ -1.53
GPNMB-205ENST00000463011 SLITRK4Q8IW52 837 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 MARK1Q9P0L2 795 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 HCN2Q9UL51 889 aa5.49□□□□□ -1.53
GPNMB-205ENST00000463011 hCG_2014768A0A024R1R8 64 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 PDE2AO00408 941 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 MAP3K6O95382 1288 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 EIF6P56537 245 aaKnown RBP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 MLLT1Q03111 559 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 LAMC2Q13753 1193 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 UBAP2LQ14157 1087 aaKnown RBP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 RASA3Q14644 834 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 HFE2Q6ZVN8 426 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 TRIM42Q8IWZ5 723 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 CELF2-AS1Q8N7Q2 184 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 FAM169BQ8N8A8 192 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 TMEM102Q8N9M5 508 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 CRBNQ96SW2 442 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 BHLHE41Q9C0J9 482 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 NUCKS1Q9H1E3 243 aaKnown RBP5.48□□□□□ -1.53
GPNMB-205ENST00000463011 RASSF4Q9H2L5 321 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 ZNF576Q9H609 170 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 ST7Q9NRC1 585 aa5.48□□□□□ -1.53
GPNMB-205ENST00000463011 ROBO2Q9HCK4 1378 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 LOC102724428A0A0B4J2F2 783 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 FAM187AA6NFU0 413 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 ZBTB42B2RXF5 422 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 ENPP3O14638 875 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 BNIP3LO60238 219 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 HOXD8P13378 290 aaPredicted RBP5.47□□□□□ -1.53
GPNMB-205ENST00000463011 CD33P20138 364 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 IBSPP21815 317 aaPredicted RBP5.47□□□□□ -1.53
GPNMB-205ENST00000463011 SIK1P57059 783 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 RPS26P62854 115 aaKnown RBP5.47□□□□□ -1.53
GPNMB-205ENST00000463011 TNNI3KQ59H18 835 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 RPS26P11Q5JNZ5 115 aaPredicted RBP5.47□□□□□ -1.53
GPNMB-205ENST00000463011 RASIP1Q5U651 963 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 LRP10Q7Z4F1 713 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 KCNB2Q92953 911 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 PLD4Q96BZ4 506 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 FERD3LQ96RJ6 166 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 DNAJC7Q99615 494 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 PBX4Q9BYU1 374 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 MUC3BQ9H195 1237 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 MIR1-1HGQ9H1L0 117 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 IGFLR1Q9H665 355 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 CWC22Q9HCG8 908 aaKnown RBP5.47□□□□□ -1.53
GPNMB-205ENST00000463011 TMEM39AQ9NV64 488 aa5.47□□□□□ -1.53
GPNMB-205ENST00000463011 SOBPA7XYQ1 873 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 MAN1A2O60476 641 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 RAB11FIP3O75154 756 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 BMP6P22004 513 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 GIPRP48546 466 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 NRLP54845 237 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 ATP11AP98196 1134 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 SEPT6Q14141 434 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 DBN1Q16643 649 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 KANK3Q6NY19 840 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 GK5Q6ZS86 529 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 FILIP1Q7Z7B0 1213 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 CCDC84Q86UT8 332 aaPredicted RBP5.46□□□□□ -1.54
GPNMB-205ENST00000463011 LILRB2Q8N423 598 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 SH3TC2Q8TF17 1288 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 GATAD2BQ8WXI9 593 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 ABHD17AQ96GS6 310 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 POP1Q99575 1024 aaKnown RBP5.46□□□□□ -1.54
GPNMB-205ENST00000463011 EFCC1Q9HA90 598 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 BRMS1Q9HCU9 246 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 IFT57Q9NWB7 429 aa5.46□□□□□ -1.54
GPNMB-205ENST00000463011 FAM221AA4D161 298 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 AVPP01185 164 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 ZNF165P49910 485 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 ANAPC15P60006 121 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms