RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PLA2G4DQ86XP0 818 aa14.54□□□□□ -0.08
HDAC4-208ENST00000463007 GTF3C6Q969F1 213 aa14.54□□□□□ -0.08
HDAC4-208ENST00000463007 ISCA1Q9BUE6 129 aa14.54□□□□□ -0.08
HDAC4-208ENST00000463007 AHDC1Q5TGY3 1603 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-208ENST00000463007 SCRN1Q12765 414 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 HSP90AB3PQ58FF7 597 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 UTP14CQ5TAP6 766 aaKnown RBP14.53□□□□□ -0.08
HDAC4-208ENST00000463007 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 HOMER1Q86YM7 354 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 CCDC191Q8NCU4 936 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 DBNDD2Q9BQY9 259 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 RREB1Q92766 1687 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 HAND2P61296 217 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 ANKRD1Q15327 319 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 TICAM2Q86XR7 235 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 GPHNQ9NQX3 736 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-208ENST00000463007 LRP5O75197 1615 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 NWD2Q9ULI1 1742 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 MYH3P11055 1940 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 GOLGA8FQ08AF8 430 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 GOLGA8DPQ0D2H9 430 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 ATG3Q9NT62 314 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 CWC25Q9NXE8 425 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-208ENST00000463007 OGFRQ9NZT2 677 aa14.53□□□□□ -0.08
HDAC4-208ENST00000463007 CYP21A2P08686 494 aa14.52□□□□□ -0.08
HDAC4-208ENST00000463007 ERCC6LQ2NKX8 1250 aa14.52□□□□□ -0.08
HDAC4-208ENST00000463007 LRRN4CLQ8ND94 238 aa14.52□□□□□ -0.08
HDAC4-208ENST00000463007 CCDC85AQ96PX6 553 aaPredicted RBP14.52□□□□□ -0.08
HDAC4-208ENST00000463007 NRAPQ86VF7 1730 aa14.52□□□□□ -0.08
HDAC4-208ENST00000463007 SYT10Q6XYQ8 523 aa14.52□□□□□ -0.09
HDAC4-208ENST00000463007 TMC6Q7Z403 805 aa14.52□□□□□ -0.09
HDAC4-208ENST00000463007 TRIM28Q13263 835 aaKnown RBP14.51□□□□□ -0.09
HDAC4-208ENST00000463007 TDRD7Q8NHU6 1098 aaKnown RBP14.51□□□□□ -0.09
HDAC4-208ENST00000463007 ZNF330Q9Y3S2 320 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-208ENST00000463007 SH3TC1Q8TE82 1336 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 VGLL3A8MV65 326 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 GOLIM4O00461 696 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 CIAO1O76071 339 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 FBXO38Q6PIJ6 1188 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 CFAP45Q9UL16 551 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 ROBO1Q9Y6N7 1651 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 BCL9O00512 1426 aa14.51□□□□□ -0.09
HDAC4-208ENST00000463007 LMOD1P29536 600 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-208ENST00000463007 HMG20BQ9P0W2 317 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 NUP98P52948 1817 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 PTPDC1A2A3K4 754 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 RESTQ13127 1097 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 PAXBP1Q9Y5B6 917 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 DOT1LQ8TEK3 1739 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 ARAP2Q8WZ64 1704 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 MYH7P12883 1935 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 TIMM10P62072 90 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 TTLL5Q6EMB2 1281 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 IFNKQ9P0W0 207 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 AKAP11Q9UKA4 1901 aa14.5□□□□□ -0.09
HDAC4-208ENST00000463007 ELP1O95163 1332 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 SLIT2O94813 1529 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 MYH15Q9Y2K3 1946 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 POLR3GO15318 223 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-208ENST00000463007 IQCB1Q15051 598 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 STX1AQ16623 288 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 KIF18AQ8NI77 898 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 PLA2G12BQ9BX93 195 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 EPC1Q9H2F5 836 aa14.49□□□□□ -0.09
HDAC4-208ENST00000463007 KIF20AO95235 890 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 STOX1Q6ZVD7 989 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 PIGBQ92521 554 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 RIC1Q4ADV7 1423 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 MARCKSP29966 332 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-208ENST00000463007 DPCR1Q3MIW9 517 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 FEZ1Q99689 392 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 IL15P40933 162 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-208ENST00000463007 CEP57L1Q8IYX8 460 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 ZFP91Q96JP5 570 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-208ENST00000463007 ZBTB3Q9H5J0 574 aa14.48□□□□□ -0.09
HDAC4-208ENST00000463007 DDX41Q9UJV9 622 aaKnown RBP14.48□□□□□ -0.09
HDAC4-208ENST00000463007 EYA2O00167 538 aa14.47□□□□□ -0.09
HDAC4-208ENST00000463007 TCIRG1Q13488 830 aa14.47□□□□□ -0.09
HDAC4-208ENST00000463007 STK38Q15208 465 aa14.47□□□□□ -0.09
HDAC4-208ENST00000463007 LRRC24Q50LG9 513 aa14.47□□□□□ -0.09
HDAC4-208ENST00000463007 CCAR2Q8N163 923 aaKnown RBP14.47□□□□□ -0.09
HDAC4-208ENST00000463007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.47□□□□□ -0.09
HDAC4-208ENST00000463007 RXRAP19793 462 aa14.47□□□□□ -0.09
HDAC4-208ENST00000463007 SNW1Q13573 536 aaKnown RBP14.47□□□□□ -0.09
HDAC4-208ENST00000463007 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
HDAC4-208ENST00000463007 XPO4Q9C0E2 1151 aaKnown RBP14.47□□□□□ -0.09
HDAC4-208ENST00000463007 CSF1RP07333 972 aa14.46□□□□□ -0.09
HDAC4-208ENST00000463007 FKBP4Q02790 459 aaKnown RBP eCLIP14.46□□□□□ -0.09
HDAC4-208ENST00000463007 ASAP1Q9ULH1 1129 aa14.46□□□□□ -0.09
HDAC4-208ENST00000463007 PHLPP1O60346 1717 aa14.46□□□□□ -0.09
HDAC4-208ENST00000463007 DHX40Q8IX18 779 aaKnown RBP14.46□□□□□ -0.09
HDAC4-208ENST00000463007 KRT222Q8N1A0 295 aa14.46□□□□□ -0.09
HDAC4-208ENST00000463007 BBXQ8WY36 941 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-208ENST00000463007 NDUFA8P51970 172 aa14.46□□□□□ -0.1
HDAC4-208ENST00000463007 STRN4Q9NRL3 753 aa14.46□□□□□ -0.1
HDAC4-208ENST00000463007 DNAI1Q9UI46 699 aa14.46□□□□□ -0.1
HDAC4-208ENST00000463007 FBXO3Q9UK99 471 aa14.46□□□□□ -0.1
HDAC4-208ENST00000463007 CCZ1BP86790 482 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms