RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 KMT5BQ4FZB7 885 aa7.74□□□□□ -1.17
SGCE-209ENST00000462731 FAM102BQ5T8I3 360 aa7.74□□□□□ -1.17
SGCE-209ENST00000462731 RELL1Q8IUW5 271 aa7.74□□□□□ -1.17
SGCE-209ENST00000462731 TNS4Q8IZW8 715 aa7.74□□□□□ -1.17
SGCE-209ENST00000462731 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
SGCE-209ENST00000462731 ACTR10Q9NZ32 417 aa7.74□□□□□ -1.17
SGCE-209ENST00000462731 LRFN2Q9ULH4 789 aa7.74□□□□□ -1.17
SGCE-209ENST00000462731 SALL2Q9Y467 1007 aaPredicted RBP7.74□□□□□ -1.17
SGCE-209ENST00000462731 FAM187AA6NFU0 413 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 SLC26A4O43511 780 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 CCNYL3P0C7X3 344 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 MLC1Q15049 377 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 FAM26DQ5JW98 314 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 USPL1Q5W0Q7 1092 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 ZKSCAN2Q63HK3 967 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 RNF19BQ6ZMZ0 732 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 RNF180Q86T96 592 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 SEPT12Q8IYM1 358 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 CPXCR1Q8N123 301 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 CCDC89Q8N998 374 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 ZSWIM2Q8NEG5 633 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 ZNF296Q8WUU4 475 aaPredicted RBP7.73□□□□□ -1.17
SGCE-209ENST00000462731 EVA1BQ9NVM1 165 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 GTF2A1LQ9UNN4 478 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
SGCE-209ENST00000462731 PDE8AO60658 829 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 RNASEH2AO75792 299 aaKnown RBP7.72□□□□□ -1.17
SGCE-209ENST00000462731 RAPGEF3O95398 923 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 TRIM27P14373 513 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 AKAP4Q5JQC9 854 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 PERM1Q5SV97 790 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 NECAB2Q7Z6G3 386 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 AFAP1L2Q8N4X5 818 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 MAGEB6Q8N7X4 407 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 ENAHQ8N8S7 591 aaPredicted RBP7.72□□□□□ -1.17
SGCE-209ENST00000462731 ATL2Q8NHH9 583 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 CCDC74AQ96AQ1 378 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 IFT122Q9HBG6 1241 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 NGRNQ9NPE2 291 aaKnown RBP7.72□□□□□ -1.17
SGCE-209ENST00000462731 ST7Q9NRC1 585 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 FRMD4BQ9Y2L6 1034 aa7.72□□□□□ -1.17
SGCE-209ENST00000462731 TRIM37O94972 964 aa7.71□□□□□ -1.18
SGCE-209ENST00000462731 SLC19A1P41440 591 aa7.71□□□□□ -1.18
SGCE-209ENST00000462731 ZAP70P43403 619 aa7.71□□□□□ -1.18
SGCE-209ENST00000462731 TMEM67Q5HYA8 995 aa7.71□□□□□ -1.18
SGCE-209ENST00000462731 C1orf53Q5VUE5 145 aa7.71□□□□□ -1.18
SGCE-209ENST00000462731 ZNF669Q96BR6 464 aaPredicted RBP7.71□□□□□ -1.18
SGCE-209ENST00000462731 LUZP4Q9P127 313 aa7.71□□□□□ -1.18
SGCE-209ENST00000462731 NOL7Q9UMY1 257 aaKnown RBP7.71□□□□□ -1.18
SGCE-209ENST00000462731 MAPRE3Q9UPY8 281 aa7.71□□□□□ -1.18
SGCE-209ENST00000462731 PRRT4C9JH25 899 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 KATNA1O75449 491 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 RPLP1P05386 114 aaKnown RBP7.7□□□□□ -1.18
SGCE-209ENST00000462731 NBPF7P0C2Y1 421 aaPredicted RBP7.7□□□□□ -1.18
SGCE-209ENST00000462731 SRGNP10124 158 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 CPEP16870 476 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 GBP2P32456 591 aaPredicted RBP7.7□□□□□ -1.18
SGCE-209ENST00000462731 APOBRQ0VD83 1088 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 PICALMQ13492 652 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 FXNQ16595 210 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 ANO1Q5XXA6 986 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 BLOC1S3Q6QNY0 202 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 RIN3Q8TB24 985 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 EPS8L3Q8TE67 593 aaKnown RBP7.7□□□□□ -1.18
SGCE-209ENST00000462731 RTFDC1Q9BY42 306 aaPredicted RBP7.7□□□□□ -1.18
SGCE-209ENST00000462731 STRN4Q9NRL3 753 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 KCNG1Q9UIX4 513 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 FBXO2Q9UK22 296 aaPredicted RBP7.7□□□□□ -1.18
SGCE-209ENST00000462731 ASAP1Q9ULH1 1129 aa7.7□□□□□ -1.18
SGCE-209ENST00000462731 SUPT16HQ9Y5B9 1047 aaKnown RBP7.7□□□□□ -1.18
SGCE-209ENST00000462731 BICDL2A1A5D9 508 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 IRS4O14654 1257 aaPredicted RBP7.69□□□□□ -1.18
SGCE-209ENST00000462731 DIAPH1O60610 1272 aaKnown RBP7.69□□□□□ -1.18
SGCE-209ENST00000462731 RFPL1O75677 317 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 RFPL3O75679 317 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 RLBP1P12271 317 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 DGKGP49619 791 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 CCDC184Q52MB2 194 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 BRICD5Q6PL45 260 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 PASD1Q8IV76 773 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 ETFBKMTQ8IXQ9 262 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 FAM169BQ8N8A8 192 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 ANKRD42Q8N9B4 389 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 CHMP4CQ96CF2 233 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 NUDT16Q96DE0 195 aaKnown RBP7.69□□□□□ -1.18
SGCE-209ENST00000462731 HERPUD2Q9BSE4 406 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 MUC3BQ9H195 1237 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 POLG2Q9UHN1 485 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 USP25Q9UHP3 1055 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 DAAM1Q9Y4D1 1078 aa7.69□□□□□ -1.18
SGCE-209ENST00000462731 FAM181BA6NEQ2 426 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 GSG1L2A8MUP6 293 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 MINDY4BA8MYZ0 360 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 GREM1O60565 184 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 IRS1P35568 1242 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 GIPRP48546 466 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 PPM1FP49593 454 aaPredicted RBP7.68□□□□□ -1.18
SGCE-209ENST00000462731 SCNN1DP51172 638 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms