RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 DOK7Q18PE1 504 aa18.52■□□□□ 0.56
TMEM39A-203ENST00000461654 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
TMEM39A-203ENST00000461654 CNOT7Q9UIV1 285 aaKnown RBP18.52■□□□□ 0.56
TMEM39A-203ENST00000461654 PSMD14O00487 310 aa18.51■□□□□ 0.55
TMEM39A-203ENST00000461654 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
TMEM39A-203ENST00000461654 VIL1P09327 827 aaKnown RBP18.51■□□□□ 0.55
TMEM39A-203ENST00000461654 GORABQ5T7V8 394 aa18.51■□□□□ 0.55
TMEM39A-203ENST00000461654 H7C1D1 291 aa18.5■□□□□ 0.55
TMEM39A-203ENST00000461654 PDE8BO95263 885 aa18.5■□□□□ 0.55
TMEM39A-203ENST00000461654 ATP2B3Q16720 1220 aa18.5■□□□□ 0.55
TMEM39A-203ENST00000461654 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
TMEM39A-203ENST00000461654 KCNQ5Q9NR82 932 aa18.5■□□□□ 0.55
TMEM39A-203ENST00000461654 A0A1B0GUL7 405 aa18.49■□□□□ 0.55
TMEM39A-203ENST00000461654 HIRAP54198 1017 aaPredicted RBP18.49■□□□□ 0.55
TMEM39A-203ENST00000461654 PODNQ7Z5L7 613 aa18.49■□□□□ 0.55
TMEM39A-203ENST00000461654 LEMD3Q9Y2U8 911 aa18.49■□□□□ 0.55
TMEM39A-203ENST00000461654 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
TMEM39A-203ENST00000461654 ZNF609O15014 1411 aa18.49■□□□□ 0.55
TMEM39A-203ENST00000461654 CNTNAP1P78357 1384 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 G3V3G9 751 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 EIF5BO60841 1220 aaKnown RBP18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 PUM3Q15397 648 aaKnown RBP18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 DCAF8Q5TAQ9 597 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 TSHZ3Q63HK5 1081 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 MICALL2Q8IY33 904 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 ANKRD2Q9GZV1 360 aa18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.48■□□□□ 0.55
TMEM39A-203ENST00000461654 MED23Q9ULK4 1368 aa18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 TIMM10P62072 90 aa18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 CHRNDQ07001 517 aa18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 BACH2Q9BYV9 841 aa18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 MKRN1Q9UHC7 482 aaKnown RBP18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 DBNLQ9UJU6 430 aaKnown RBP18.47■□□□□ 0.55
TMEM39A-203ENST00000461654 RASSF10A6NK89 507 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 CDC45O75419 566 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 IFIT1P09914 478 aaKnown RBP18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 SLC5A1P13866 664 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 SDSP20132 328 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 AGBL3Q8NEM8 1001 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 PI4K2BQ8TCG2 481 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 LPIN2Q92539 896 aa18.46■□□□□ 0.55
TMEM39A-203ENST00000461654 SHTN1A0MZ66 631 aa18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 WTIPA6NIX2 430 aaPredicted RBP18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 ATP5JP18859 108 aa18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 C8orf34Q49A92 452 aa18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 CST9Q5W186 159 aa18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 VGLL2Q8N8G2 317 aa18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 RILPL2Q969X0 211 aa18.45■□□□□ 0.54
TMEM39A-203ENST00000461654 KCNJ4P48050 445 aa18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 DEFB115Q30KQ5 88 aa18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 RSBN1LQ6PCB5 846 aaPredicted RBP18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 SAMD7Q7Z3H4 446 aa18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 COA1Q9GZY4 146 aa18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 ZNF804BA4D1E1 1349 aa18.44■□□□□ 0.54
TMEM39A-203ENST00000461654 USP17L3A6NCW0 530 aa18.43■□□□□ 0.54
TMEM39A-203ENST00000461654 USP17L4A6NCW7 530 aa18.43■□□□□ 0.54
TMEM39A-203ENST00000461654 TRAF5O00463 557 aa18.43■□□□□ 0.54
TMEM39A-203ENST00000461654 TAF5LO75529 589 aa18.43■□□□□ 0.54
TMEM39A-203ENST00000461654 ZNF280AP59817 542 aaPredicted RBP18.43■□□□□ 0.54
TMEM39A-203ENST00000461654 USP17L1Q7RTZ2 530 aa18.43■□□□□ 0.54
TMEM39A-203ENST00000461654 GMLQ99445 158 aa18.43■□□□□ 0.54
TMEM39A-203ENST00000461654 VEGFBP49765 207 aa18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 FMR1Q06787 632 aaKnown RBP eCLIP18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 UBE4AQ14139 1066 aa18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 EVI5LQ96CN4 794 aa18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 GLIS2Q9BZE0 524 aaPredicted RBP18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 BOLA2Q9H3K6 86 aa18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 UPF2Q9HAU5 1272 aaKnown RBP18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 SCN9AQ15858 1988 aa18.42■□□□□ 0.54
TMEM39A-203ENST00000461654 EGFRP00533 1210 aa18.41■□□□□ 0.54
TMEM39A-203ENST00000461654 FGFR2P21802 821 aa18.41■□□□□ 0.54
TMEM39A-203ENST00000461654 TBC1D10BQ4KMP7 808 aaPredicted RBP18.41■□□□□ 0.54
TMEM39A-203ENST00000461654 STRIP1Q5VSL9 837 aa18.41■□□□□ 0.54
TMEM39A-203ENST00000461654 TXNRD3Q86VQ6 643 aa18.41■□□□□ 0.54
TMEM39A-203ENST00000461654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.41■□□□□ 0.54
TMEM39A-203ENST00000461654 ABT1Q9ULW3 272 aaKnown RBP18.41■□□□□ 0.54
TMEM39A-203ENST00000461654 MAP4K4O95819 1239 aaPredicted RBP18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 UQCRFS1P1P0C7P4 283 aa18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 HSPA1AP0DMV8 641 aaKnown RBP18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 HSPA1BP0DMV9 641 aaKnown RBP18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 ADORA1P30542 326 aa18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 MMP14P50281 582 aa18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 TLL2Q9Y6L7 1015 aa18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 IRS2Q9Y4H2 1338 aa18.4■□□□□ 0.54
TMEM39A-203ENST00000461654 USP17L8P0C7I0 530 aa18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 KIF4BQ2VIQ3 1234 aa18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 CAVIN4Q5BKX8 364 aa18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 DACT2Q5SW24 774 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms