RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 FBXO33Q7Z6M2 555 aa8.91□□□□□ -0.98
LSG1-205ENST00000461343 KCNB2Q92953 911 aa8.91□□□□□ -0.98
LSG1-205ENST00000461343 AIDAQ96BJ3 306 aa8.91□□□□□ -0.98
LSG1-205ENST00000461343 NOL10Q9BSC4 688 aaKnown RBP8.91□□□□□ -0.98
LSG1-205ENST00000461343 ATP6V0A2Q9Y487 856 aa8.91□□□□□ -0.98
LSG1-205ENST00000461343 CYP46A1Q9Y6A2 500 aa8.91□□□□□ -0.98
LSG1-205ENST00000461343 EP400Q96L91 3159 aa8.91□□□□□ -0.98
LSG1-205ENST00000461343 MAST3O60307 1309 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 TAF5LO75529 589 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 LDHCP07864 332 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 PCP11498 1178 aaKnown RBP8.9□□□□□ -0.98
LSG1-205ENST00000461343 ADD2P35612 726 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 PHKA1P46020 1223 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 TRDNQ13061 729 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 RASGRF1Q13972 1273 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 AMIGO3Q86WK7 504 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 HELBQ8NG08 1087 aaPredicted RBP8.9□□□□□ -0.98
LSG1-205ENST00000461343 ZSCAN31Q96LW9 406 aaPredicted RBP8.9□□□□□ -0.98
LSG1-205ENST00000461343 VPS33BQ9H267 617 aa8.9□□□□□ -0.98
LSG1-205ENST00000461343 SH2B1Q9NRF2 756 aaPredicted RBP8.9□□□□□ -0.98
LSG1-205ENST00000461343 RBM8AQ9Y5S9 174 aaKnown RBP8.9□□□□□ -0.98
LSG1-205ENST00000461343 A0A0D9SFI3 127 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 G3V3G9 751 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 PDE6AP16499 860 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 PLCG2P16885 1265 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 PTMSP20962 102 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 NEK4P51957 841 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 VPS53Q5VIR6 699 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 GIMAP6Q6P9H5 292 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 BLOC1S2Q6QNY1 142 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 AMOTL1Q8IY63 956 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 INTS4Q96HW7 963 aaKnown RBP8.89□□□□□ -0.99
LSG1-205ENST00000461343 FAM84BQ96KN1 310 aaPredicted RBP8.89□□□□□ -0.99
LSG1-205ENST00000461343 FAM227BQ96M60 508 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 ZC3H12CQ9C0D7 883 aaKnown RBP8.89□□□□□ -0.99
LSG1-205ENST00000461343 COA1Q9GZY4 146 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 ALDH8A1Q9H2A2 487 aaPredicted RBP8.89□□□□□ -0.99
LSG1-205ENST00000461343 RNF41Q9H4P4 317 aaPredicted RBP8.89□□□□□ -0.99
LSG1-205ENST00000461343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.89□□□□□ -0.99
LSG1-205ENST00000461343 MYH7P12883 1935 aa8.89□□□□□ -0.99
LSG1-205ENST00000461343 UFL1O94874 794 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 BAG3O95817 575 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 CYP2E1P05181 493 aaPredicted RBP8.88□□□□□ -0.99
LSG1-205ENST00000461343 SLC3A2P08195 630 aaKnown RBP8.88□□□□□ -0.99
LSG1-205ENST00000461343 BCAMP50895 628 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 NECTIN1Q15223 517 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 ALX1Q15699 326 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 CREB3L3Q68CJ9 461 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 DPP8Q6V1X1 898 aaPredicted RBP8.88□□□□□ -0.99
LSG1-205ENST00000461343 C3orf67Q6ZVT6 689 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 C2CD5Q86YS7 1000 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 MPNDQ8N594 471 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 CNNM2Q9H8M5 875 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 RAI14Q9P0K7 980 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 TAOK2Q9UL54 1235 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 NSFL1CQ9UNZ2 370 aaKnown RBP8.88□□□□□ -0.99
LSG1-205ENST00000461343 KIF3AQ9Y496 699 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.88□□□□□ -0.99
LSG1-205ENST00000461343 CASZ1Q86V15 1759 aa8.88□□□□□ -0.99
LSG1-205ENST00000461343 TNRC6CQ9HCJ0 1690 aaKnown RBP8.88□□□□□ -0.99
LSG1-205ENST00000461343 WDR19Q8NEZ3 1342 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 ZNF213O14771 459 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 GPAA1O43292 621 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 LDHBP07195 334 aaKnown RBP8.87□□□□□ -0.99
LSG1-205ENST00000461343 MMP14P50281 582 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 TGFB2P61812 414 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 NUCB2P80303 420 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 FGD1P98174 961 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 NAA16Q6N069 864 aaPredicted RBP8.87□□□□□ -0.99
LSG1-205ENST00000461343 PRPF40BQ6NWY9 871 aaKnown RBP8.87□□□□□ -0.99
LSG1-205ENST00000461343 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 RALYLQ86SE5 291 aaKnown RBP8.87□□□□□ -0.99
LSG1-205ENST00000461343 DZIP1Q86YF9 867 aaKnown RBP8.87□□□□□ -0.99
LSG1-205ENST00000461343 RTKN2Q8IZC4 609 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 MTA3Q9BTC8 594 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 MTFR1LQ9H019 292 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 ZNF287Q9HBT7 754 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 CHMP5Q9NZZ3 219 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 ABCF2Q9UG63 623 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 LIMCH1Q9UPQ0 1083 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 SNX14Q9Y5W7 946 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 LRRC37AA6NMS7 1700 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 AKAP11Q9UKA4 1901 aa8.87□□□□□ -0.99
LSG1-205ENST00000461343 A0A1B0GUL6 1792 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 ZNF532Q9HCE3 1301 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 MAGEB6P1A0A0J9YX57 407 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 PATL2C9JE40 543 aaKnown RBP8.86□□□□□ -0.99
LSG1-205ENST00000461343 C6orf229H3BNL8 230 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 SLC27A2O14975 620 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 DHX16O60231 1041 aaKnown RBP8.86□□□□□ -0.99
LSG1-205ENST00000461343 APPP05067 770 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 HSPD1P10809 573 aaKnown RBP8.86□□□□□ -0.99
LSG1-205ENST00000461343 IL1R1P14778 569 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 CASTP20810 708 aaKnown RBP8.86□□□□□ -0.99
LSG1-205ENST00000461343 GYG1P46976 350 aa8.86□□□□□ -0.99
LSG1-205ENST00000461343 SART3Q15020 963 aaKnown RBP8.86□□□□□ -0.99
LSG1-205ENST00000461343 SMIM5Q71RC9 77 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms