RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-219ENST00000461159 TFCP2Q12800 502 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 TRAPPC3LQ5T215 181 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
HDAC9-219ENST00000461159 EAF2Q96CJ1 260 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-219ENST00000461159 KIF1BPQ96EK5 621 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 TMEM63CQ9P1W3 806 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 ZDHHC9Q9Y397 364 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 NDUFB9Q9Y6M9 179 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 CNTNAP4Q9C0A0 1308 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 C3orf67Q6ZVT6 689 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 AACSQ86V21 672 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 TTLL11Q8NHH1 800 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 SEC31BQ9NQW1 1179 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 SNAP23O00161 211 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 NPHP1O15259 732 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 SLFN14P0C7P3 912 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 ZNF827Q17R98 1081 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 CCDC57Q2TAC2 916 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 DEFB132Q7Z7B7 95 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 JMYQ8N9B5 988 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 UTP14AQ9BVJ6 771 aaKnown RBP9.98□□□□□ -0.81
HDAC9-219ENST00000461159 TFCP2L1Q9NZI6 479 aa9.98□□□□□ -0.81
HDAC9-219ENST00000461159 COL5A3P25940 1745 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-219ENST00000461159 ITGA6P23229 1130 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 TIMM10P62072 90 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 C11orf91Q3C1V1 193 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 LRCH2Q5VUJ6 765 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 RILPL2Q969X0 211 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 RSPH14Q9UHP6 348 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 NARFQ9UHQ1 456 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 SH3TC1Q8TE82 1336 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 RAB11FIP3O75154 756 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 KIAA2012Q0VF49 1180 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 MYBPC2Q14324 1141 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 EZH2Q15910 746 aaKnown RBP9.97□□□□□ -0.81
HDAC9-219ENST00000461159 RC3H1Q5TC82 1133 aaKnown RBP9.97□□□□□ -0.81
HDAC9-219ENST00000461159 DNAJC14Q6Y2X3 702 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-219ENST00000461159 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-219ENST00000461159 ZNF710Q8N1W2 664 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 CLASRPQ8N2M8 674 aaKnown RBP9.97□□□□□ -0.81
HDAC9-219ENST00000461159 HELBQ8NG08 1087 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-219ENST00000461159 OSBPL3Q9H4L5 887 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 OGFRQ9NZT2 677 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 ZNF652Q9Y2D9 606 aa9.97□□□□□ -0.81
HDAC9-219ENST00000461159 CTAGE5O15320 804 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 COQ9O75208 318 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 NTSR2O95665 410 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 LIG1P18858 919 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 CTSWP56202 376 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 IFIT5Q13325 482 aaKnown RBP9.96□□□□□ -0.81
HDAC9-219ENST00000461159 SLC51AQ86UW1 340 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 PI4K2BQ8TCG2 481 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 NEUROD6Q96NK8 337 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 SETDB2Q96T68 719 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 COPRSQ9NQ92 184 aa9.96□□□□□ -0.81
HDAC9-219ENST00000461159 IFIT2P09913 472 aaKnown RBP9.96□□□□□ -0.82
HDAC9-219ENST00000461159 NEK4P51957 841 aa9.96□□□□□ -0.82
HDAC9-219ENST00000461159 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.82
HDAC9-219ENST00000461159 ATG9AQ7Z3C6 839 aa9.96□□□□□ -0.82
HDAC9-219ENST00000461159 TMX3Q96JJ7 454 aa9.96□□□□□ -0.82
HDAC9-219ENST00000461159 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
HDAC9-219ENST00000461159 IL25Q9H293 177 aa9.96□□□□□ -0.82
HDAC9-219ENST00000461159 STAP2Q9UGK3 403 aa9.96□□□□□ -0.82
HDAC9-219ENST00000461159 BRD1O95696 1058 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 TRDNQ13061 729 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 LDHAL6AQ6ZMR3 332 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 EDC3Q96F86 508 aaKnown RBP9.95□□□□□ -0.82
HDAC9-219ENST00000461159 SUFUQ9UMX1 484 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 TAF1LQ8IZX4 1826 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 TUBGCP6Q96RT7 1819 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 USP42Q9H9J4 1324 aaKnown RBP9.95□□□□□ -0.82
HDAC9-219ENST00000461159 WTIPA6NIX2 430 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-219ENST00000461159 PDE8AO60658 829 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 NFIXQ14938 502 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 SPTY2D1Q68D10 685 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-219ENST00000461159 RNF214Q8ND24 703 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 INTS4Q96HW7 963 aaKnown RBP9.95□□□□□ -0.82
HDAC9-219ENST00000461159 LY75O60449 1722 aa9.95□□□□□ -0.82
HDAC9-219ENST00000461159 C4BP0C0L5 1744 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 RREB1Q92766 1687 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 CSF1RP07333 972 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 POLD1P28340 1107 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 SLC27A3Q5K4L6 730 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-219ENST00000461159 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 MSL3Q8N5Y2 521 aaKnown RBP9.94□□□□□ -0.82
HDAC9-219ENST00000461159 FAM184AQ8NB25 1140 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-219ENST00000461159 DBNDD2Q9BQY9 259 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 PDGFDQ9GZP0 370 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-219ENST00000461159 RASSF4Q9H2L5 321 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 BOLA2Q9H3K6 86 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 TAF5LO75529 589 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 CUL4AQ13619 759 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 UVSSAQ2YD98 709 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 CNNM1Q9NRU3 951 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms