RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 NARFQ9UHQ1 456 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 B4E1Z4 1266 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 ZFYP08048 801 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 DNM1Q05193 864 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 CTDSPL2Q05D32 466 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 MICU3Q86XE3 530 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 NUP133Q8WUM0 1156 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 SDR42E1Q8WUS8 393 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 PLA2G12BQ9BX93 195 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 SH2B1Q9NRF2 756 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 PRDM1O75626 825 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 STOX1Q6ZVD7 989 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 PANK2Q9BZ23 570 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 NYXQ9GZU5 481 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 SPATA31A6Q5VVP1 1343 aa11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 PRC1O43663 620 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 MYL10Q9BUA6 226 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 ISY1Q9ULR0 285 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 KLF18A0A0U1RQI7 1052 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 SYCE3A1L190 88 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 GOLGA8BA8MQT2 603 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 KLRK1P26718 216 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 NFIXQ14938 502 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 OTUD7BQ6GQQ9 843 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 TTC14Q96N46 770 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 LRRC4BQ9NT99 713 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 AK9Q5TCS8 1911 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 F8W031 263 aaPredicted RBP11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 ATP2B1P20020 1258 aa11.04□□□□□ -0.64
NUDCD3-203ENST00000460110 ZSCAN22P10073 491 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 L1TD1Q5T7N2 865 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 CLEC4GQ6UXB4 293 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 MPNDQ8N594 471 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 NACAP1Q9BZK3 213 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 MINPP1Q9UNW1 487 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 ATP6V1DQ9Y5K8 247 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 BCL9LQ86UU0 1499 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 GADD45BO75293 160 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 USP48Q86UV5 1035 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 PPP1R1BQ9UD71 204 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 RANBP6O60518 1105 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 CUL4AQ13619 759 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 NAA16Q6N069 864 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 ZNF622Q969S3 477 aaKnown RBP eCLIP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 TM6SF1Q9BZW5 370 aa11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-203ENST00000460110 NCOA7Q8NI08 942 aa11.02□□□□□ -0.64
NUDCD3-203ENST00000460110 PARP4Q9UKK3 1724 aaKnown RBP11.02□□□□□ -0.64
NUDCD3-203ENST00000460110 IFIT3O14879 490 aaKnown RBP11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 BRD1O95696 1058 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 ADD2P35612 726 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 CDC37L1Q7L3B6 337 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 BICD2Q8TD16 824 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 CYP2D7A0A087X1C5 515 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 MCM5P33992 734 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 SYNE3Q6ZMZ3 975 aa11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 AATFQ9NY61 560 aaKnown RBP eCLIP11.02□□□□□ -0.65
NUDCD3-203ENST00000460110 SERPINB2P05120 415 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 PDCP20941 246 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 DYNLL1P63167 89 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 DSCC1Q9BVC3 393 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 F13A1P00488 732 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 DDIT3P35638 169 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 SF3A1Q15459 793 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 CAMK4Q16566 473 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 TXNRD1Q16881 649 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 LCORLQ8N3X6 602 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 LMBRD1Q9NUN5 540 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 LTBP4Q8N2S1 1624 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 MED23Q9ULK4 1368 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 ERICH2A1L162 156 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 UFL1O94874 794 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 HMGB1P09429 215 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 PTMSP20962 102 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 ST5P78524 1137 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 TMEM67Q5HYA8 995 aa11.01□□□□□ -0.65
NUDCD3-203ENST00000460110 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
NUDCD3-203ENST00000460110 RAD21O60216 631 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 MFSD6Q6ZSS7 791 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 CMTR1Q8N1G2 835 aaKnown RBP11□□□□□ -0.65
NUDCD3-203ENST00000460110 GJB4Q9NTQ9 266 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 TXNRD3Q86VQ6 643 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 ABCC6O95255 1503 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 ABCC12Q96J65 1359 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 NHSL1Q5SYE7 1610 aa11□□□□□ -0.65
NUDCD3-203ENST00000460110 SLIT2O94813 1529 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms