RNA–Protein interactions for RNA: ENST00000456026.1

LINC01653-201, Transcript of long intergenic non-protein coding RNA 1653, humanhuman

TSL 1 (best) BASIC

Gene LINC01653, Length 1,728 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01653-201ENST00000456026 RBM27Q9P2N5 1060 aaKnown RBP9.15□□□□□ -0.94
LINC01653-201ENST00000456026 SMC3Q9UQE7 1217 aa9.15□□□□□ -0.94
LINC01653-201ENST00000456026 MTMR6Q9Y217 621 aa9.15□□□□□ -0.94
LINC01653-201ENST00000456026 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.15□□□□□ -0.94
LINC01653-201ENST00000456026 BRWD3Q6RI45 1802 aa9.15□□□□□ -0.94
LINC01653-201ENST00000456026 CNTNAP4Q9C0A0 1308 aa9.15□□□□□ -0.95
LINC01653-201ENST00000456026 ATRNO75882 1429 aa9.15□□□□□ -0.95
LINC01653-201ENST00000456026 GADD45BO75293 160 aaPredicted RBP9.14□□□□□ -0.95
LINC01653-201ENST00000456026 EXOSC10Q01780 885 aaKnown RBP9.14□□□□□ -0.95
LINC01653-201ENST00000456026 KRT32Q14532 448 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
LINC01653-201ENST00000456026 CCDC102BQ68D86 513 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
LINC01653-201ENST00000456026 Q6ZUG5 572 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 LRRC2Q9BYS8 371 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 PANK2Q9BZ23 570 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 USP21Q9UK80 565 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 MROH5Q6ZUA9 1318 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 UBR3Q6ZT12 1888 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 TNRC6CQ9HCJ0 1690 aaKnown RBP9.14□□□□□ -0.95
LINC01653-201ENST00000456026 E7EWF7 191 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 PUM3Q15397 648 aaKnown RBP9.14□□□□□ -0.95
LINC01653-201ENST00000456026 ERFEQ4G0M1 354 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 L1TD1Q5T7N2 865 aaKnown RBP9.14□□□□□ -0.95
LINC01653-201ENST00000456026 CLEC4GQ6UXB4 293 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 LPIN2Q92539 896 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 AGXT2Q9BYV1 514 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 GDPD2Q9HCC8 539 aa9.14□□□□□ -0.95
LINC01653-201ENST00000456026 ECM29Q5VYK3 1845 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 SPATA31A6Q5VVP1 1343 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 TCRBV5S4A2TA0A5A2 114 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 WTIPA6NIX2 430 aaPredicted RBP9.13□□□□□ -0.95
LINC01653-201ENST00000456026 F13A1P00488 732 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 ZFYP08048 801 aaPredicted RBP9.13□□□□□ -0.95
LINC01653-201ENST00000456026 ADD2P35612 726 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 ANKRD1Q15327 319 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 CAVIN1Q6NZI2 390 aaKnown RBP9.13□□□□□ -0.95
LINC01653-201ENST00000456026 USP48Q86UV5 1035 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 TMEM87AQ8NBN3 555 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 APPBP2Q92624 585 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
LINC01653-201ENST00000456026 FAM212AQ96EL1 285 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 GRPEL1Q9HAV7 217 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 WWC3Q9ULE0 1092 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 CNPY2Q9Y2B0 182 aa9.13□□□□□ -0.95
LINC01653-201ENST00000456026 CACNA1SQ13698 1873 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 FGAP02671 866 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC01653-201ENST00000456026 ZNF445P59923 1031 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 STK3Q13188 491 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 WASHC4Q2M389 1173 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 ZSCAN23Q3MJ62 389 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 CCDC152Q4G0S7 254 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 RC3H1Q5TC82 1133 aaKnown RBP9.12□□□□□ -0.95
LINC01653-201ENST00000456026 TBC1D9BQ66K14 1250 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 GTF3C6Q969F1 213 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
LINC01653-201ENST00000456026 SRP68Q9UHB9 627 aaKnown RBP9.12□□□□□ -0.95
LINC01653-201ENST00000456026 GPAA1O43292 621 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 JAK2O60674 1132 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 NCLP19338 710 aaKnown RBP9.11□□□□□ -0.95
LINC01653-201ENST00000456026 MRE11P49959 708 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 RASGRF1Q13972 1273 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 DHX32Q7L7V1 743 aaKnown RBP9.11□□□□□ -0.95
LINC01653-201ENST00000456026 BRF1Q92994 677 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 GPHNQ9NQX3 736 aaPredicted RBP9.11□□□□□ -0.95
LINC01653-201ENST00000456026 BAZ2AQ9UIF9 1905 aaKnown RBP9.11□□□□□ -0.95
LINC01653-201ENST00000456026 PFKFB2O60825 505 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 RPS6KA4O75676 772 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 CTDNEP1O95476 244 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 UQCRFS1P1P0C7P4 283 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 PDE6AP16499 860 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 BCAMP50895 628 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 HAND2P61296 217 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 CHRNDQ07001 517 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 APOBRQ0VD83 1088 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 SF3B3Q15393 1217 aaKnown RBP9.11□□□□□ -0.95
LINC01653-201ENST00000456026 SLC10A5Q5PT55 438 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 SLC9C2Q5TAH2 1124 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 CDC37L1Q7L3B6 337 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 CHST3Q7LGC8 479 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 SPATA5Q8NB90 893 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 MPHOSPH8Q99549 860 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 NARFQ9UHQ1 456 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 ISY1Q9ULR0 285 aaKnown RBP9.11□□□□□ -0.95
LINC01653-201ENST00000456026 ZNF652Q9Y2D9 606 aa9.11□□□□□ -0.95
LINC01653-201ENST00000456026 COL1A1P02452 1464 aaPredicted RBP9.1□□□□□ -0.95
LINC01653-201ENST00000456026 ZNF532Q9HCE3 1301 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 TIAM2Q8IVF5 1701 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 ONECUT3O60422 494 aaPredicted RBP9.1□□□□□ -0.95
LINC01653-201ENST00000456026 SLC5A1P13866 664 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 HSPA1LP34931 641 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 ANTXR2P58335 489 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 SCRN1Q12765 414 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 UBE3CQ15386 1083 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 LARP1BQ659C4 914 aaKnown RBP9.1□□□□□ -0.95
LINC01653-201ENST00000456026 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
LINC01653-201ENST00000456026 MB21D2Q8IYB1 491 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms