RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 UBP1Q9NZI7 540 aa7.94□□□□□ -1.14
CDH19-202ENST00000454642 A0A096LPE4 126 aa7.93□□□□□ -1.14
CDH19-202ENST00000454642 A0A1W2PPZ6 126 aa7.93□□□□□ -1.14
CDH19-202ENST00000454642 ENC1O14682 589 aa7.93□□□□□ -1.14
CDH19-202ENST00000454642 PAGE1O75459 146 aa7.93□□□□□ -1.14
CDH19-202ENST00000454642 BMS1Q14692 1282 aaKnown RBP7.93□□□□□ -1.14
CDH19-202ENST00000454642 GOLM1Q8NBJ4 401 aa7.93□□□□□ -1.14
CDH19-202ENST00000454642 GPN3Q9UHW5 284 aaPredicted RBP7.93□□□□□ -1.14
CDH19-202ENST00000454642 LOC102724428A0A0B4J2F2 783 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 ZBTB42B2RXF5 422 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 GPR25O00155 361 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 NFKBIEO00221 500 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 PDE2AO00408 941 aaPredicted RBP7.92□□□□□ -1.14
CDH19-202ENST00000454642 HMGB1P09429 215 aaKnown RBP7.92□□□□□ -1.14
CDH19-202ENST00000454642 RLBP1P12271 317 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 FGFR3P22607 806 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 SIK1P57059 783 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 SNAP47Q5SQN1 464 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 TTBK2Q6IQ55 1244 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 NXPE3Q969Y0 559 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 RHOVQ96L33 236 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 CEP44Q9C0F1 390 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 OSBPL2Q9H1P3 480 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 ZNF408Q9H9D4 720 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 SEC31BQ9NQW1 1179 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 ATXN7L1Q9ULK2 861 aaPredicted RBP7.92□□□□□ -1.14
CDH19-202ENST00000454642 PRR12Q9ULL5 1215 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 CADPSQ9ULU8 1353 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 ITPKAP23677 461 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 NRLP54845 237 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 FAAP100Q0VG06 881 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 CAMK2GQ13555 558 aaPredicted RBP7.92□□□□□ -1.14
CDH19-202ENST00000454642 NEUROD1Q13562 356 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
CDH19-202ENST00000454642 NECAB3Q96P71 396 aaPredicted RBP7.92□□□□□ -1.14
CDH19-202ENST00000454642 SUPT16HQ9Y5B9 1047 aaKnown RBP7.92□□□□□ -1.14
CDH19-202ENST00000454642 EIF2AK2P19525 551 aaKnown RBP7.91□□□□□ -1.14
CDH19-202ENST00000454642 ITGA6P23229 1130 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 CANXP27824 592 aaKnown RBP7.91□□□□□ -1.14
CDH19-202ENST00000454642 CTBSQ01459 385 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 SOGA3Q5TF21 947 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 CKAP2LQ8IYA6 745 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 TMEM102Q8N9M5 508 aaPredicted RBP7.91□□□□□ -1.14
CDH19-202ENST00000454642 SLC16A10Q8TF71 515 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 PBX4Q9BYU1 374 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 UBE2OQ9C0C9 1292 aaKnown RBP7.91□□□□□ -1.14
CDH19-202ENST00000454642 BHLHE41Q9C0J9 482 aaPredicted RBP7.91□□□□□ -1.14
CDH19-202ENST00000454642 MUC3BQ9H195 1237 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 EFCC1Q9HA90 598 aa7.91□□□□□ -1.14
CDH19-202ENST00000454642 GHRHP01286 108 aa7.9□□□□□ -1.14
CDH19-202ENST00000454642 TFE3P19532 575 aaPredicted RBP7.9□□□□□ -1.14
CDH19-202ENST00000454642 ETFBP38117 255 aa7.9□□□□□ -1.14
CDH19-202ENST00000454642 CRKP46108 304 aa7.9□□□□□ -1.14
CDH19-202ENST00000454642 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
CDH19-202ENST00000454642 ANKRD24Q8TF21 1146 aa7.9□□□□□ -1.14
CDH19-202ENST00000454642 ZNF576Q9H609 170 aa7.9□□□□□ -1.14
CDH19-202ENST00000454642 ZFYVE1Q9HBF4 777 aa7.9□□□□□ -1.14
CDH19-202ENST00000454642 TMA7Q9Y2S6 64 aaKnown RBP7.9□□□□□ -1.14
CDH19-202ENST00000454642 CDC14CA4D256 554 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 HOXD8P13378 290 aaPredicted RBP7.89□□□□□ -1.15
CDH19-202ENST00000454642 GPLD1P80108 840 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 CEP135Q66GS9 1140 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 SYT9Q86SS6 491 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 TRPM4Q8TD43 1214 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 CPLX3Q8WVH0 158 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 POP1Q99575 1024 aaKnown RBP7.89□□□□□ -1.15
CDH19-202ENST00000454642 NT5C1AQ9BXI3 368 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 DNAJB12Q9NXW2 375 aaKnown RBP7.89□□□□□ -1.15
CDH19-202ENST00000454642 H3BM21 787 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 TLR3O15455 904 aaKnown RBP7.89□□□□□ -1.15
CDH19-202ENST00000454642 GARTP22102 1010 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 CCDC81Q6ZN84 652 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 JARID2Q92833 1246 aaPredicted RBP7.89□□□□□ -1.15
CDH19-202ENST00000454642 ANAPC16Q96DE5 110 aa7.89□□□□□ -1.15
CDH19-202ENST00000454642 TLDC2A0PJX2 215 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 GREM1O60565 184 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 CPB1P15086 417 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 LMNB1P20700 586 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 PCBP4P57723 403 aaKnown RBP7.88□□□□□ -1.15
CDH19-202ENST00000454642 LMNB2Q03252 620 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 BNC2Q6ZN30 1099 aaPredicted RBP7.88□□□□□ -1.15
CDH19-202ENST00000454642 AGMOQ6ZNB7 445 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 IRF7Q92985 503 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 RBSNQ9H1K0 784 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 PHF24Q9UPV7 400 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
CDH19-202ENST00000454642 PPM1GO15355 546 aaPredicted RBP7.87□□□□□ -1.15
CDH19-202ENST00000454642 SOX9P48436 509 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 SEZ6Q53EL9 994 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 ADAMTSL4Q6UY14 1074 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 ZNF662Q6ZS27 426 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 ANKS3Q6ZW76 656 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 FAM35AQ86V20 835 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 FBXO27Q8NI29 283 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 NKD1Q969G9 470 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 KCNQ5Q9NR82 932 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 TMEM39AQ9NV64 488 aa7.87□□□□□ -1.15
CDH19-202ENST00000454642 SMNDC1O75940 238 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH19-202ENST00000454642 F13A1P00488 732 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms