RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
USP41-202ENST00000454608 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
USP41-202ENST00000454608 DLL1O00548 723 aa13.41□□□□□ -0.26
USP41-202ENST00000454608 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
USP41-202ENST00000454608 GNRH1P01148 92 aa13.41□□□□□ -0.26
USP41-202ENST00000454608 PRMT2P55345 433 aa13.41□□□□□ -0.26
USP41-202ENST00000454608 FKBP1AP62942 108 aaKnown RBP13.41□□□□□ -0.26
USP41-202ENST00000454608 CAP1Q01518 475 aa13.41□□□□□ -0.26
USP41-202ENST00000454608 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
USP41-202ENST00000454608 NBPF12Q5TAG4 269 aaPredicted RBP13.41□□□□□ -0.26
USP41-202ENST00000454608 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
USP41-202ENST00000454608 OPTNQ96CV9 577 aa13.41□□□□□ -0.26
USP41-202ENST00000454608 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
USP41-202ENST00000454608 SZT2Q5T011 3432 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 KCNJ4P48050 445 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 GTF2A2P52657 109 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 NEXNQ0ZGT2 675 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 KIF22Q14807 665 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 RALBP1Q15311 655 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 MPHOSPH8Q99549 860 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 VEZTQ9HBM0 779 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 MAP3K2Q9Y2U5 619 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 A0A1B0GUL6 1792 aa13.4□□□□□ -0.26
USP41-202ENST00000454608 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 RASA3Q14644 834 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 CCDC30Q5VVM6 783 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 C15orf52Q6ZUT6 534 aaKnown RBP13.39□□□□□ -0.27
USP41-202ENST00000454608 CERS5Q8N5B7 392 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 SLC17A8Q8NDX2 589 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
USP41-202ENST00000454608 ELP3Q9H9T3 547 aa13.39□□□□□ -0.27
USP41-202ENST00000454608 CCL15-CCL14A0A0B4J2E2 113 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 IGKV5-2P06315 115 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 KLRK1P26718 216 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 CCL15Q16663 113 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 NKX2-3Q8TAU0 364 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 BRI3BPQ8WY22 251 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 DPF3Q92784 378 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 ZCCHC17Q9NP64 241 aaKnown RBP13.38□□□□□ -0.27
USP41-202ENST00000454608 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
USP41-202ENST00000454608 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
USP41-202ENST00000454608 ARAP2Q8WZ64 1704 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 H7C1W4 665 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 IL1R1P14778 569 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 ITGA6P23229 1130 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 GNAI1P63096 354 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 CALD1Q05682 793 aaKnown RBP13.37□□□□□ -0.27
USP41-202ENST00000454608 CHRNDQ07001 517 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 ZNF804AQ7Z570 1209 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 SH3TC2Q8TF17 1288 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 PLA2G12BQ9BX93 195 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 PCDHAC2Q9Y5I4 1007 aa13.37□□□□□ -0.27
USP41-202ENST00000454608 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
USP41-202ENST00000454608 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
USP41-202ENST00000454608 F8W031 263 aaPredicted RBP13.36□□□□□ -0.27
USP41-202ENST00000454608 ELL2O00472 640 aaPredicted RBP13.36□□□□□ -0.27
USP41-202ENST00000454608 TLR2O60603 784 aa13.36□□□□□ -0.27
USP41-202ENST00000454608 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
USP41-202ENST00000454608 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
USP41-202ENST00000454608 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
USP41-202ENST00000454608 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
USP41-202ENST00000454608 CSADQ9Y600 493 aa13.36□□□□□ -0.27
USP41-202ENST00000454608 IRS2Q9Y4H2 1338 aa13.36□□□□□ -0.27
USP41-202ENST00000454608 A0A1W2PPC1 479 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 NEURL1BA8MQ27 555 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
USP41-202ENST00000454608 CSF1RP07333 972 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.35□□□□□ -0.27
USP41-202ENST00000454608 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 FAM43AQ8N2R8 423 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 NR2E3Q9Y5X4 410 aa13.35□□□□□ -0.27
USP41-202ENST00000454608 CETPP11597 493 aa13.34□□□□□ -0.27
USP41-202ENST00000454608 TNNI2P48788 182 aa13.34□□□□□ -0.27
USP41-202ENST00000454608 VGLL4Q14135 290 aa13.34□□□□□ -0.27
USP41-202ENST00000454608 HELBQ8NG08 1087 aaPredicted RBP13.34□□□□□ -0.27
USP41-202ENST00000454608 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP41-202ENST00000454608 PRO3102Q9H379 93 aa13.34□□□□□ -0.27
USP41-202ENST00000454608 ZNF70Q9UC06 446 aaPredicted RBP13.34□□□□□ -0.27
USP41-202ENST00000454608 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
USP41-202ENST00000454608 ANKRD18BA2A2Z9 1011 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 SPDYE5A6NIY4 337 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 HOXD10P28358 340 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 GJA8P48165 433 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 CWF19L2Q2TBE0 894 aaKnown RBP13.33□□□□□ -0.28
USP41-202ENST00000454608 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 SHISA4Q96DD7 197 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 TEPSINQ96N21 525 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 ARHGAP39Q9C0H5 1083 aa13.33□□□□□ -0.28
USP41-202ENST00000454608 SERPINA10Q9UK55 444 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms