RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
RFC3P1-201ENST00000454568 TAF7Q15545 349 aaPredicted RBP11.28□□□□□ -0.6
RFC3P1-201ENST00000454568 C4orf48Q5BLP8 95 aa11.28□□□□□ -0.6
RFC3P1-201ENST00000454568 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
RFC3P1-201ENST00000454568 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
RFC3P1-201ENST00000454568 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.27□□□□□ -0.61
RFC3P1-201ENST00000454568 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
RFC3P1-201ENST00000454568 TSC1Q92574 1164 aa11.27□□□□□ -0.61
RFC3P1-201ENST00000454568 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
RFC3P1-201ENST00000454568 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
RFC3P1-201ENST00000454568 USP16Q9Y5T5 823 aa11.27□□□□□ -0.61
RFC3P1-201ENST00000454568 RNF225M0QZC1 329 aaPredicted RBP11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 KCNA3P22001 575 aa11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 FSHRP23945 695 aa11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 TUSC1Q2TAM9 212 aa11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
RFC3P1-201ENST00000454568 SENP3-EIF4A1A0A087X0R7 540 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 PRAMEF22A3QJZ6 481 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 H0YIN7 160 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 NFE2L2Q16236 605 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 TBC1D9BQ66K14 1250 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 DZIP3Q86Y13 1208 aaKnown RBP11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 PNISRQ8TF01 805 aaKnown RBP11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 SETDB2Q96T68 719 aa11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
RFC3P1-201ENST00000454568 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
RFC3P1-201ENST00000454568 CCDC116Q8IYX3 515 aa11.24□□□□□ -0.61
RFC3P1-201ENST00000454568 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
RFC3P1-201ENST00000454568 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
RFC3P1-201ENST00000454568 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
RFC3P1-201ENST00000454568 RIPK4P57078 832 aa11.23□□□□□ -0.61
RFC3P1-201ENST00000454568 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
RFC3P1-201ENST00000454568 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
RFC3P1-201ENST00000454568 ZNF652Q9Y2D9 606 aa11.23□□□□□ -0.61
RFC3P1-201ENST00000454568 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
RFC3P1-201ENST00000454568 LOC100996750A0A140TA64 210 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 TRIM66O15016 1216 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 PDE6BP35913 854 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 BRCA1P38398 1863 aaKnown RBP11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 ST5P78524 1137 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 NGEFQ8N5V2 710 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 TTLL6Q8N841 843 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 CARMIL3Q8ND23 1372 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 ZNF622Q969S3 477 aaKnown RBP eCLIP11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 KRTAP4-6Q9BYQ5 205 aa11.22□□□□□ -0.61
RFC3P1-201ENST00000454568 ARFGEF1Q9Y6D6 1849 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 ADCY9O60503 1353 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 TTLL8A6PVC2 850 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 PRR5LQ6MZQ0 368 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 SH3BP5LQ7L8J4 393 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 CNBD1Q8NA66 436 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 RNF181Q9P0P0 153 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 RRP7AQ9Y3A4 280 aaKnown RBP11.21□□□□□ -0.61
RFC3P1-201ENST00000454568 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 LMOD3Q0VAK6 560 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 CLEC4GQ6UXB4 293 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 CCDC146Q8IYE0 955 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 NRXN2Q9P2S2 1712 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 SCN7AQ01118 1682 aa11.2□□□□□ -0.62
RFC3P1-201ENST00000454568 LILRB3O75022 631 aa11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 MYL6BP14649 208 aa11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 GTF2E1P29083 439 aaPredicted RBP11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 TMPOP42166 694 aaKnown RBP11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 NBPF10Q6P3W6 841 aaKnown RBP11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 TMEM151AQ8N4L1 468 aa11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 NIP7Q9Y221 180 aaKnown RBP eCLIP11.19□□□□□ -0.62
RFC3P1-201ENST00000454568 TPTE2Q6XPS3 522 aa11.18□□□□□ -0.62
RFC3P1-201ENST00000454568 KIF6Q6ZMV9 814 aa11.18□□□□□ -0.62
RFC3P1-201ENST00000454568 CDV3Q9UKY7 258 aaKnown RBP11.18□□□□□ -0.62
RFC3P1-201ENST00000454568 LAS1LQ9Y4W2 734 aaKnown RBP11.18□□□□□ -0.62
RFC3P1-201ENST00000454568 KDM2BQ8NHM5 1336 aa11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 EIF2S2P20042 333 aaKnown RBP11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 RASSF7Q02833 373 aa11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 PTSQ03393 145 aa11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 QPCTQ16769 361 aa11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 C16orf71Q8IYS4 520 aaPredicted RBP11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 BCORQ6W2J9 1755 aa11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
RFC3P1-201ENST00000454568 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
RFC3P1-201ENST00000454568 C21orf2O43822 256 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms