RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 PRDM2Q13029 1718 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 CDC25BP30305 580 aa9.15□□□□□ -0.94
SCN3A-205ENST00000453007 USP5P45974 858 aa9.15□□□□□ -0.94
SCN3A-205ENST00000453007 IREB2P48200 963 aaKnown RBP9.15□□□□□ -0.94
SCN3A-205ENST00000453007 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
SCN3A-205ENST00000453007 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.94
SCN3A-205ENST00000453007 DCAF11Q8TEB1 546 aa9.15□□□□□ -0.94
SCN3A-205ENST00000453007 WFDC12Q8WWY7 111 aa9.15□□□□□ -0.94
SCN3A-205ENST00000453007 SRA1Q9HD15 236 aaKnown RBP9.15□□□□□ -0.94
SCN3A-205ENST00000453007 LINC01387J3KSC0 135 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 DLL1O00548 723 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 DYRK3O43781 588 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 CDC27P30260 824 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 TXNDC11Q6PKC3 985 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 XKR5Q6UX68 686 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 TMC7Q7Z402 723 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 MAP4K3Q8IVH8 894 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 C1orf127Q8N9H9 656 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 PBX4Q9BYU1 374 aa9.14□□□□□ -0.95
SCN3A-205ENST00000453007 FZD6O60353 706 aa9.13□□□□□ -0.95
SCN3A-205ENST00000453007 SETDB1Q15047 1291 aa9.13□□□□□ -0.95
SCN3A-205ENST00000453007 CEP120Q8N960 986 aa9.13□□□□□ -0.95
SCN3A-205ENST00000453007 TMC1Q8TDI8 760 aa9.13□□□□□ -0.95
SCN3A-205ENST00000453007 RBCK1Q9BYM8 510 aa9.13□□□□□ -0.95
SCN3A-205ENST00000453007 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
SCN3A-205ENST00000453007 ABCA10Q8WWZ4 1543 aa9.13□□□□□ -0.95
SCN3A-205ENST00000453007 RECKO95980 971 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
SCN3A-205ENST00000453007 PTPRAP18433 802 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 NOS3P29474 1203 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 FAM117BQ6P1L5 589 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 PMEPA1Q969W9 287 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 CITED4Q96RK1 184 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 CCDC87Q9NVE4 849 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 GAPVD1Q14C86 1478 aa9.12□□□□□ -0.95
SCN3A-205ENST00000453007 GRIN2BQ13224 1484 aa9.11□□□□□ -0.95
SCN3A-205ENST00000453007 ITGB7P26010 798 aa9.11□□□□□ -0.95
SCN3A-205ENST00000453007 EHHADHQ08426 723 aa9.11□□□□□ -0.95
SCN3A-205ENST00000453007 PDE3BQ13370 1112 aa9.11□□□□□ -0.95
SCN3A-205ENST00000453007 AKTIPQ9H8T0 292 aa9.11□□□□□ -0.95
SCN3A-205ENST00000453007 SALL4Q9UJQ4 1053 aa9.11□□□□□ -0.95
SCN3A-205ENST00000453007 PHACTR2O75167 634 aa9.1□□□□□ -0.95
SCN3A-205ENST00000453007 SH2B1Q9NRF2 756 aaPredicted RBP9.1□□□□□ -0.95
SCN3A-205ENST00000453007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.1□□□□□ -0.95
SCN3A-205ENST00000453007 ALX3O95076 343 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 H2AFB1P0C5Y9 115 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 H2AFB2P0C5Z0 115 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 ACPPP15309 386 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 CABP4P57796 275 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 TSNAXIP1Q2TAA8 658 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 POP1Q99575 1024 aaKnown RBP9.09□□□□□ -0.95
SCN3A-205ENST00000453007 CARD10Q9BWT7 1032 aa9.09□□□□□ -0.95
SCN3A-205ENST00000453007 TNFRSF21O75509 655 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 EPHA1P21709 976 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 PRSS36Q5K4E3 855 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 ZMYM1Q5SVZ6 1142 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 ADAMTSL4Q6UY14 1074 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 SNX29Q8TEQ0 813 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 MEGF10Q96KG7 1140 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
SCN3A-205ENST00000453007 CHRDQ9H2X0 955 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 TOP2BQ02880 1626 aa9.08□□□□□ -0.96
SCN3A-205ENST00000453007 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
SCN3A-205ENST00000453007 PDE2AO00408 941 aaPredicted RBP9.07□□□□□ -0.96
SCN3A-205ENST00000453007 FSCN2O14926 492 aa9.07□□□□□ -0.96
SCN3A-205ENST00000453007 EREGO14944 169 aa9.07□□□□□ -0.96
SCN3A-205ENST00000453007 TREHO43280 583 aa9.07□□□□□ -0.96
SCN3A-205ENST00000453007 TRPA1O75762 1119 aa9.07□□□□□ -0.96
SCN3A-205ENST00000453007 CD68P34810 354 aaPredicted RBP9.07□□□□□ -0.96
SCN3A-205ENST00000453007 BCL11AQ9H165 835 aa9.07□□□□□ -0.96
SCN3A-205ENST00000453007 DZANK1Q9NVP4 752 aa9.07□□□□□ -0.96
SCN3A-205ENST00000453007 FOXD3Q9UJU5 478 aaPredicted RBP9.07□□□□□ -0.96
SCN3A-205ENST00000453007 ARHGEF11O15085 1522 aa9.06□□□□□ -0.96
SCN3A-205ENST00000453007 GLB1P16278 677 aa9.06□□□□□ -0.96
SCN3A-205ENST00000453007 FMR1Q06787 632 aaKnown RBP eCLIP9.06□□□□□ -0.96
SCN3A-205ENST00000453007 GJD3Q8N144 294 aa9.06□□□□□ -0.96
SCN3A-205ENST00000453007 AGGF1Q8N302 714 aaeCLIP9.06□□□□□ -0.96
SCN3A-205ENST00000453007 TMEM130Q8N3G9 435 aa9.06□□□□□ -0.96
SCN3A-205ENST00000453007 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
SCN3A-205ENST00000453007 BACH2Q9BYV9 841 aa9.06□□□□□ -0.96
SCN3A-205ENST00000453007 ADAM19Q9H013 955 aa9.06□□□□□ -0.96
SCN3A-205ENST00000453007 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 SYNJ2O15056 1496 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 ARAP1Q96P48 1450 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 EDN3P14138 238 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 DSC3Q14574 896 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 ACAD11Q709F0 780 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 KLHL23Q8NBE8 558 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 OSMRQ99650 979 aa9.05□□□□□ -0.96
SCN3A-205ENST00000453007 MAGI1Q96QZ7 1491 aaPredicted RBP9.04□□□□□ -0.96
SCN3A-205ENST00000453007 SCO2A0A1W2PP80 73 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 H3BRJ5 948 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 NEFLP07196 543 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 PLCB3Q01970 1234 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 MRPL58Q14197 206 aaKnown RBP9.04□□□□□ -0.96
SCN3A-205ENST00000453007 FOXD4L6Q3SYB3 417 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms