RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CHRNDQ07001 517 aa13.92□□□□□ -0.18
VTA1-203ENST00000452973 ZSCAN25Q6NSZ9 544 aa13.92□□□□□ -0.18
VTA1-203ENST00000452973 NPHP1O15259 732 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 UQCRFS1P1P0C7P4 283 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 PDE6AP16499 860 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 TBC1D9BQ66K14 1250 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 STK11IPQ8N1F8 1099 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 MAGEB6Q8N7X4 407 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 ANP32BQ92688 251 aaKnown RBP13.91□□□□□ -0.18
VTA1-203ENST00000452973 AIDAQ96BJ3 306 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 AK7Q96M32 723 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 PHF14O94880 888 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 FGFR2P21802 821 aa13.91□□□□□ -0.18
VTA1-203ENST00000452973 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
VTA1-203ENST00000452973 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
VTA1-203ENST00000452973 SYAP1Q96A49 352 aaPredicted RBP13.91□□□□□ -0.18
VTA1-203ENST00000452973 ARID4AP29374 1257 aaPredicted RBP13.9□□□□□ -0.18
VTA1-203ENST00000452973 GUCY1B3Q02153 619 aa13.9□□□□□ -0.18
VTA1-203ENST00000452973 LRSAM1Q6UWE0 723 aa13.9□□□□□ -0.18
VTA1-203ENST00000452973 CCNL1Q9UK58 526 aaPredicted RBP13.9□□□□□ -0.18
VTA1-203ENST00000452973 ABCF2Q9UG63 623 aa13.9□□□□□ -0.18
VTA1-203ENST00000452973 PRC1O43663 620 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 UBE2HP62256 183 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
VTA1-203ENST00000452973 PTPDC1A2A3K4 754 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 ZPR1O75312 459 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 GYG1P46976 350 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 KRT85P78386 507 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
VTA1-203ENST00000452973 CDC5LQ99459 802 aaKnown RBP13.89□□□□□ -0.19
VTA1-203ENST00000452973 INCENPQ9NQS7 918 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 LRP2BPQ9P2M1 347 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 PFKFB2O60825 505 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
VTA1-203ENST00000452973 MAP3K12Q12852 859 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
VTA1-203ENST00000452973 MIGA1Q8NAN2 632 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 ARMT1Q9H993 441 aa13.89□□□□□ -0.19
VTA1-203ENST00000452973 EP400Q96L91 3159 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 CLEC4GQ6UXB4 293 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 AMIGO3Q86WK7 504 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 TICAM2Q86XR7 235 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 NCOA7Q8NI08 942 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 ZNF512BQ96KM6 892 aaPredicted RBP13.88□□□□□ -0.19
VTA1-203ENST00000452973 SETDB2Q96T68 719 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 MBD4O95243 580 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 CTDNEP1O95476 244 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 MCM5P33992 734 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 TRDNQ13061 729 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 NBPF5PQ86XG9 351 aaPredicted RBP13.88□□□□□ -0.19
VTA1-203ENST00000452973 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
VTA1-203ENST00000452973 ABCC12Q96J65 1359 aa13.88□□□□□ -0.19
VTA1-203ENST00000452973 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 KDM4AO75164 1064 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 UBE3CQ15386 1083 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 VPS37DQ86XT2 251 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
VTA1-203ENST00000452973 NWD2Q9ULI1 1742 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
VTA1-203ENST00000452973 AKAP11Q9UKA4 1901 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 NKX2-3Q8TAU0 364 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 GOLGA6L4A6NEF3 574 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 PRKAB2O43741 272 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 CSPP1Q1MSJ5 1256 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 SPATA32Q96LK8 384 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 TOMM22Q9NS69 142 aa13.87□□□□□ -0.19
VTA1-203ENST00000452973 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
VTA1-203ENST00000452973 SPEF2Q9C093 1822 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 GOLGA8BA8MQT2 603 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 RXRAP19793 462 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 STRBPQ96SI9 672 aaKnown RBP13.86□□□□□ -0.19
VTA1-203ENST00000452973 TCRBV5S4A2TA0A5A2 114 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 B4E1Z4 1266 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 TSPY26PQ9H489 355 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
VTA1-203ENST00000452973 ANTXR2P58335 489 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 NBPF3Q9H094 633 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 NAPBQ9H115 298 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 RRP12Q5JTH9 1297 aaKnown RBP13.85□□□□□ -0.19
VTA1-203ENST00000452973 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 OTUD7BQ6GQQ9 843 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 CCDC144CPQ8IYA2 1237 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 MB21D2Q8IYB1 491 aaPredicted RBP13.85□□□□□ -0.19
VTA1-203ENST00000452973 AGXT2Q9BYV1 514 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 RRAGDQ9NQL2 400 aaPredicted RBP13.85□□□□□ -0.19
VTA1-203ENST00000452973 RAI14Q9P0K7 980 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 TAF1P21675 1872 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 CAMK4Q16566 473 aa13.85□□□□□ -0.19
VTA1-203ENST00000452973 ARHGEF1Q92888 912 aaKnown RBP13.85□□□□□ -0.19
VTA1-203ENST00000452973 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
VTA1-203ENST00000452973 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms