RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZFYVE27Q5T4F4 411 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 TRIM22Q8IYM9 498 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 FANCIQ9NVI1 1328 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 HSPA1AP0DMV8 641 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 HSPA1BP0DMV9 641 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 KMT5BQ4FZB7 885 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 PODNQ7Z5L7 613 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 CCDC117Q8IWD4 279 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 PANK1Q8TE04 598 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 PCCAP05165 728 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 LNPKQ9C0E8 428 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 ZNF804BA4D1E1 1349 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 HMGB1P09429 215 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 CTCFLQ8NI51 663 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 USP31Q70CQ4 1352 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 SP4Q02446 784 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 STYK1Q6J9G0 422 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 BOLA2Q9H3K6 86 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 MCM9Q9NXL9 1143 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 MSRAQ9UJ68 235 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 EXOC6BQ9Y2D4 811 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 IMMTQ16891 758 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 RNF169Q8NCN4 708 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 USP40Q9NVE5 1235 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 SCNN1DP51172 638 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 CTSWP56202 376 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 NOGQ13253 232 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 MAP1SQ66K74 1059 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 MROH5Q6ZUA9 1318 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 CNTNAP4Q9C0A0 1308 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 ZBED4O75132 1171 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 TAF5LO75529 589 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 LBX1P52954 281 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
CDC42BPA-209ENST00000448940 UQCRHLA0A096LP55 91 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 ALDH1A1P00352 501 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 PSMA5P28066 241 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 KIF4BQ2VIQ3 1234 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 CHST3Q7LGC8 479 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 HSCBQ8IWL3 235 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 SSH1Q8WYL5 1049 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 COA1Q9GZY4 146 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 CNOT7Q9UIV1 285 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 RNF123Q5XPI4 1314 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 EYA2O00167 538 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 PIDD1Q9HB75 910 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 VAT1LQ9HCJ6 419 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 TSPY3P0CV98 308 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 TSPY8P0CW00 308 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 TPD52L1Q16890 204 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 GOLIM4O00461 696 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 CA12O43570 354 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 AOC3Q16853 763 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 NBPF20Q3BBV1 942 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 HS1BP3Q53T59 392 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 TBC1D9BQ66K14 1250 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 PRKCSHP14314 528 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 LPIN2Q92539 896 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 RNF208Q9H0X6 261 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 PHAXQ9H814 394 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 HSPA6P17066 643 aa6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 NOM1Q5C9Z4 860 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-209ENST00000448940 KCNQ3O43525 872 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 PRC1O43663 620 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 MICALL2Q8IY33 904 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 CPXCR1Q8N123 301 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 CEP152O94986 1710 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 ST18O60284 1047 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 FCGRTP55899 365 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 PRR5LQ6MZQ0 368 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 LINC00116Q8NCU8 138 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 IQGAP1P46940 1657 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 MAGEB6P1A0A0J9YX57 407 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 OTUD5Q96G74 571 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 ZFYP08048 801 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 SRGAP2BP0DMP2 458 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 CT47A1Q5JQC4 288 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 LDHDQ86WU2 507 aa6.59□□□□□ -1.35
CDC42BPA-209ENST00000448940 FKTNO75072 461 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 ACTN1P12814 892 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 UBE4AQ14139 1066 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 GCKRQ14397 625 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 SP8Q8IXZ3 490 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 C8orf58Q8NAV2 365 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 TRIM6Q9C030 488 aaPredicted RBP6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 KIF13AQ9H1H9 1805 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 USP42Q9H9J4 1324 aaKnown RBP6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 TMEM265A0A087WTH1 108 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 RASSF7Q02833 373 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 ARID5AQ03989 594 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 KIAA1841Q6NSI8 718 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 CRAMP1Q96RY5 1269 aa6.59□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZBED9Q6R2W3 1325 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 NRXN1Q9ULB1 1477 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 FBXL21Q9UKT6 434 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 ECE2O60344 883 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms