RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MFSD10Q14728 455 aa12.63□□□□□ -0.39
VIPAS39-203ENST00000448935 RUFY3Q7L099 469 aa12.63□□□□□ -0.39
VIPAS39-203ENST00000448935 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-203ENST00000448935 ZSCAN31Q96LW9 406 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-203ENST00000448935 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
VIPAS39-203ENST00000448935 NLRP3Q96P20 1036 aa12.63□□□□□ -0.39
VIPAS39-203ENST00000448935 DDX11L8A8MPP1 907 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 ANKRD1Q15327 319 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 CCDC102BQ68D86 513 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 TTC14Q96N46 770 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 SEC31BQ9NQW1 1179 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 UBR3Q6ZT12 1888 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 MCM4P33991 863 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 ZAP70P43403 619 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 BLOC1S2Q6QNY1 142 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 APPBP2Q92624 585 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 PDRG1Q9NUG6 133 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 SRP68Q9UHB9 627 aaKnown RBP12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
VIPAS39-203ENST00000448935 MCAMP43121 646 aa12.61□□□□□ -0.39
VIPAS39-203ENST00000448935 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-203ENST00000448935 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
VIPAS39-203ENST00000448935 SH2B1Q9NRF2 756 aaPredicted RBP12.61□□□□□ -0.39
VIPAS39-203ENST00000448935 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
VIPAS39-203ENST00000448935 NPHP1O15259 732 aa12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 MAP3K13O43283 966 aa12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 HMGB1P09429 215 aaKnown RBP12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 AK2P54819 239 aa12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 CHRNDQ07001 517 aa12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 SEC62Q99442 399 aaKnown RBP12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 CTNNA3Q9UI47 895 aa12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.6□□□□□ -0.39
VIPAS39-203ENST00000448935 MAST3O60307 1309 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 GOLGA6L22H0YM25 854 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 PHF14O94880 888 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 PHKA1P46020 1223 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 SCARF1Q14162 830 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 HELBQ8NG08 1087 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 CRISPLD2Q9H0B8 497 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 TRIM37O94972 964 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 HSPD1P10809 573 aaKnown RBP12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 UBE3CQ15386 1083 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 ANKRD2Q9GZV1 360 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 LRRC4BQ9NT99 713 aa12.59□□□□□ -0.39
VIPAS39-203ENST00000448935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 PDIA4P13667 645 aaKnown RBP12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 RPS6KB1P23443 525 aa12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 ADD2P35612 726 aa12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 RPS8P62241 208 aaKnown RBP12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 MAP3K12Q12852 859 aa12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
VIPAS39-203ENST00000448935 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
VIPAS39-203ENST00000448935 CAVIN4Q5BKX8 364 aa12.57□□□□□ -0.4
VIPAS39-203ENST00000448935 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
VIPAS39-203ENST00000448935 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
VIPAS39-203ENST00000448935 OSBP2Q969R2 916 aa12.57□□□□□ -0.4
VIPAS39-203ENST00000448935 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
VIPAS39-203ENST00000448935 M0R2C6 588 aa12.56□□□□□ -0.4
VIPAS39-203ENST00000448935 PLSCR1O15162 318 aa12.56□□□□□ -0.4
VIPAS39-203ENST00000448935 IDH1O75874 414 aaKnown RBP12.56□□□□□ -0.4
VIPAS39-203ENST00000448935 CYP21A2P08686 494 aa12.56□□□□□ -0.4
VIPAS39-203ENST00000448935 NFIXQ14938 502 aa12.56□□□□□ -0.4
VIPAS39-203ENST00000448935 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
VIPAS39-203ENST00000448935 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
VIPAS39-203ENST00000448935 ST5P78524 1137 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 SKOR2Q2VWA4 1001 aaPredicted RBP12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 PI16Q6UXB8 463 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 AMIGO3Q86WK7 504 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 CHMP4CQ96CF2 233 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 ZNF804BA4D1E1 1349 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 GPAA1O43292 621 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 CHGBP05060 677 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 CPA1P15085 419 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 RXRBP28702 533 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 RASGRF1Q13972 1273 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
VIPAS39-203ENST00000448935 TAF1P21675 1872 aa12.54□□□□□ -0.4
VIPAS39-203ENST00000448935 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms