RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 RASGRF1Q13972 1273 aa19.85■□□□□ 0.77
LAPTM4B-201ENST00000445593 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
LAPTM4B-201ENST00000445593 SYAP1Q96A49 352 aaPredicted RBP19.85■□□□□ 0.77
LAPTM4B-201ENST00000445593 FBXO3Q9UK99 471 aa19.85■□□□□ 0.77
LAPTM4B-201ENST00000445593 PTPDC1A2A3K4 754 aa19.84■□□□□ 0.77
LAPTM4B-201ENST00000445593 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
LAPTM4B-201ENST00000445593 OTUD7BQ6GQQ9 843 aa19.84■□□□□ 0.77
LAPTM4B-201ENST00000445593 MAGEB6Q8N7X4 407 aa19.84■□□□□ 0.77
LAPTM4B-201ENST00000445593 FTOQ9C0B1 505 aaKnown RBP eCLIP19.84■□□□□ 0.772e-10■□□□□ 10.1
LAPTM4B-201ENST00000445593 PDCP20941 246 aa19.84■□□□□ 0.77
LAPTM4B-201ENST00000445593 LRRFIP1Q32MZ4 808 aaKnown RBP19.84■□□□□ 0.77
LAPTM4B-201ENST00000445593 ZNF213O14771 459 aa19.83■□□□□ 0.77
LAPTM4B-201ENST00000445593 PHF14O94880 888 aa19.83■□□□□ 0.77
LAPTM4B-201ENST00000445593 UBE2HP62256 183 aa19.83■□□□□ 0.77
LAPTM4B-201ENST00000445593 KRT85P78386 507 aa19.83■□□□□ 0.77
LAPTM4B-201ENST00000445593 RALYLQ86SE5 291 aaKnown RBP19.83■□□□□ 0.77
LAPTM4B-201ENST00000445593 MIGA1Q8NAN2 632 aa19.83■□□□□ 0.77
LAPTM4B-201ENST00000445593 LPIN2Q92539 896 aa19.83■□□□□ 0.77
LAPTM4B-201ENST00000445593 SLC5A1P13866 664 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 PDE6AP16499 860 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 CCDC152Q4G0S7 254 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 CCDC144CPQ8IYA2 1237 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 FAM43AQ8N2R8 423 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 TSPY26PQ9H489 355 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 ABCF2Q9UG63 623 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 MYH14Q7Z406 1995 aaKnown RBP19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 NPHP1O15259 732 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 PRC1O43663 620 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 NTSR2O95665 410 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 AIDAQ96BJ3 306 aa19.83■□□□□ 0.76
LAPTM4B-201ENST00000445593 ZFYP08048 801 aaPredicted RBP19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 ADD2P35612 726 aa19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 SPATA5Q8NB90 893 aa19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 TOMM22Q9NS69 142 aa19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 GJB4Q9NTQ9 266 aa19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 GOLGA6L4A6NEF3 574 aa19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 CTDNEP1O95476 244 aa19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 ARMT1Q9H993 441 aa19.82■□□□□ 0.76
LAPTM4B-201ENST00000445593 EXOSC10Q01780 885 aaKnown RBP19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 LTBP4Q8N2S1 1624 aa19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 HMGB1P09429 215 aaKnown RBP19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 GYG1P46976 350 aa19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 CHRNDQ07001 517 aa19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 NSUN7Q8NE18 718 aaKnown RBP19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 SPATA32Q96LK8 384 aa19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 JAG2Q9Y219 1238 aa19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 KLF18A0A0U1RQI7 1052 aa19.81■□□□□ 0.76
LAPTM4B-201ENST00000445593 GOLGA8BA8MQT2 603 aa19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 GNPATO15228 680 aa19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 MBD4O95243 580 aa19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 PDIA3P30101 505 aaKnown RBP19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 RRP12Q5JTH9 1297 aaKnown RBP19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 CTNNA3Q9UI47 895 aa19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 PRKAB2O43741 272 aa19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 LIG1P18858 919 aa19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 MROH5Q6ZUA9 1318 aa19.8■□□□□ 0.76
LAPTM4B-201ENST00000445593 CCDC183Q5T5S1 534 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 TBC1D10CQ8IV04 446 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 USP21Q9UK80 565 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 PFKFB2O60825 505 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 TBC1D9BQ66K14 1250 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 BARGINQ6ZT62 677 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 SLC51AQ86UW1 340 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 B4E1Z4 1266 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 CTDSPL2Q05D32 466 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 AMIGO3Q86WK7 504 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 SMARCC1Q92922 1105 aaPredicted RBP19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 LRP2BPQ9P2M1 347 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 ZNF652Q9Y2D9 606 aa19.79■□□□□ 0.76
LAPTM4B-201ENST00000445593 CCDC173Q0VFZ6 552 aa19.78■□□□□ 0.76
LAPTM4B-201ENST00000445593 CKAP2LQ8IYA6 745 aa19.78■□□□□ 0.76
LAPTM4B-201ENST00000445593 BICD2Q8TD16 824 aa19.78■□□□□ 0.76
LAPTM4B-201ENST00000445593 MYL10Q9BUA6 226 aa19.78■□□□□ 0.76
LAPTM4B-201ENST00000445593 TMEM87AQ8NBN3 555 aa19.78■□□□□ 0.76
LAPTM4B-201ENST00000445593 ALDH8A1Q9H2A2 487 aaPredicted RBP19.78■□□□□ 0.76
LAPTM4B-201ENST00000445593 SENP2Q9HC62 589 aa19.78■□□□□ 0.76
LAPTM4B-201ENST00000445593 FGFR2P21802 821 aa19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 ANTXR2P58335 489 aa19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 TRDNQ13061 729 aa19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 TTF1Q15361 905 aaPredicted RBP19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 MYO5AQ9Y4I1 1855 aaKnown RBP19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 ESPNB1AK53 854 aa19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 MEX3CQ5U5Q3 659 aaKnown RBP19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 NCOA7Q8NI08 942 aa19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 COL22A1Q8NFW1 1626 aaPredicted RBP19.77■□□□□ 0.76
LAPTM4B-201ENST00000445593 UQCRFS1P1P0C7P4 283 aa19.77■□□□□ 0.75
LAPTM4B-201ENST00000445593 MCM5P33992 734 aa19.77■□□□□ 0.75
LAPTM4B-201ENST00000445593 ZSCAN25Q6NSZ9 544 aa19.77■□□□□ 0.75
LAPTM4B-201ENST00000445593 CELF1Q92879 486 aaKnown RBP19.77■□□□□ 0.75
LAPTM4B-201ENST00000445593 NBPF3Q9H094 633 aa19.77■□□□□ 0.75
LAPTM4B-201ENST00000445593 VPS37DQ86XT2 251 aa19.76■□□□□ 0.75
LAPTM4B-201ENST00000445593 ZKSCAN3Q9BRR0 538 aa19.76■□□□□ 0.75
LAPTM4B-201ENST00000445593 CPLX1O14810 134 aa19.76■□□□□ 0.75
LAPTM4B-201ENST00000445593 ARID4AP29374 1257 aaPredicted RBP19.76■□□□□ 0.75
LAPTM4B-201ENST00000445593 MAP3K12Q12852 859 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 CSPP1Q1MSJ5 1256 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 MICU3Q86XE3 530 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 LEO1Q8WVC0 666 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms