RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 ELP3Q9H9T3 547 aa13.59□□□□□ -0.23
HDAC8-215ENST00000444609 MYO3BQ8WXR4 1341 aa13.59□□□□□ -0.23
HDAC8-215ENST00000444609 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
HDAC8-215ENST00000444609 HSP90AB3PQ58FF7 597 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 NBPF12Q5TAG4 269 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-215ENST00000444609 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 LRP10Q7Z4F1 713 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 DEFB118Q96PH6 123 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 CRISPLD2Q9H0B8 497 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 ZCCHC17Q9NP64 241 aaKnown RBP13.58□□□□□ -0.24
HDAC8-215ENST00000444609 FAM205AQ6ZU69 1335 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 MYPNQ86TC9 1320 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 LAMB2P55268 1798 aa13.58□□□□□ -0.24
HDAC8-215ENST00000444609 FMNL1O95466 1100 aaPredicted RBP13.57□□□□□ -0.24
HDAC8-215ENST00000444609 SLAIN1Q8ND83 568 aa13.57□□□□□ -0.24
HDAC8-215ENST00000444609 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
HDAC8-215ENST00000444609 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
HDAC8-215ENST00000444609 STRIP1Q5VSL9 837 aa13.56□□□□□ -0.24
HDAC8-215ENST00000444609 DIS3LQ8TF46 1054 aaKnown RBP13.56□□□□□ -0.24
HDAC8-215ENST00000444609 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
HDAC8-215ENST00000444609 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
HDAC8-215ENST00000444609 THUMPD2Q9BTF0 503 aaKnown RBP13.55□□□□□ -0.24
HDAC8-215ENST00000444609 PAK6Q9NQU5 681 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-215ENST00000444609 COL4A1P02462 1669 aa13.55□□□□□ -0.24
HDAC8-215ENST00000444609 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-215ENST00000444609 BTBD19C9JJ37 291 aa13.54□□□□□ -0.24
HDAC8-215ENST00000444609 EIF4A1P60842 406 aaKnown RBP13.54□□□□□ -0.24
HDAC8-215ENST00000444609 PRKCZQ05513 592 aa13.54□□□□□ -0.24
HDAC8-215ENST00000444609 PDIA6Q15084 440 aa13.54□□□□□ -0.24
HDAC8-215ENST00000444609 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-215ENST00000444609 MYLIPQ8WY64 445 aa13.54□□□□□ -0.24
HDAC8-215ENST00000444609 CPA4Q9UI42 421 aa13.54□□□□□ -0.24
HDAC8-215ENST00000444609 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
HDAC8-215ENST00000444609 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
HDAC8-215ENST00000444609 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
HDAC8-215ENST00000444609 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
HDAC8-215ENST00000444609 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-215ENST00000444609 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
HDAC8-215ENST00000444609 CETPP11597 493 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 DLGAP5Q15398 846 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 ANKLE1Q8NAG6 615 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 FBXW7Q969H0 707 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 ADGRA2Q96PE1 1338 aa13.52□□□□□ -0.25
HDAC8-215ENST00000444609 LAMA2P24043 3122 aaKnown RBP13.52□□□□□ -0.25
HDAC8-215ENST00000444609 PSME4Q14997 1843 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 XDHP47989 1333 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 ADCY3O60266 1144 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 INHAP05111 366 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 FOSL2P15408 326 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 VGLL4Q14135 290 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 MTMR14Q8NCE2 650 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 PNISRQ8TF01 805 aaKnown RBP13.51□□□□□ -0.25
HDAC8-215ENST00000444609 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
HDAC8-215ENST00000444609 MAP3K9P80192 1104 aa13.5□□□□□ -0.25
HDAC8-215ENST00000444609 RASA3Q14644 834 aa13.5□□□□□ -0.25
HDAC8-215ENST00000444609 PXYLP1Q8TE99 480 aa13.5□□□□□ -0.25
HDAC8-215ENST00000444609 C1QTNF1Q9BXJ1 281 aa13.5□□□□□ -0.25
HDAC8-215ENST00000444609 ALPK3Q96L96 1907 aa13.5□□□□□ -0.25
HDAC8-215ENST00000444609 PIEZO1Q92508 2521 aa13.5□□□□□ -0.25
HDAC8-215ENST00000444609 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
HDAC8-215ENST00000444609 ELNP15502 786 aa13.49□□□□□ -0.25
HDAC8-215ENST00000444609 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-215ENST00000444609 PROSER3Q2NL68 480 aa13.49□□□□□ -0.25
HDAC8-215ENST00000444609 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
HDAC8-215ENST00000444609 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
HDAC8-215ENST00000444609 ALYREFQ86V81 257 aaKnown RBP13.49□□□□□ -0.25
HDAC8-215ENST00000444609 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
HDAC8-215ENST00000444609 HCN4Q9Y3Q4 1203 aa13.49□□□□□ -0.25
HDAC8-215ENST00000444609 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
HDAC8-215ENST00000444609 ANXA1P04083 346 aa13.48□□□□□ -0.25
HDAC8-215ENST00000444609 FCGRTP55899 365 aa13.48□□□□□ -0.25
HDAC8-215ENST00000444609 TTYH1Q9H313 450 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-215ENST00000444609 C11orf49Q9H6J7 331 aa13.48□□□□□ -0.25
HDAC8-215ENST00000444609 PCDHAC2Q9Y5I4 1007 aa13.48□□□□□ -0.25
HDAC8-215ENST00000444609 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-215ENST00000444609 MED23Q9ULK4 1368 aa13.47□□□□□ -0.25
HDAC8-215ENST00000444609 MYO1BO43795 1136 aa13.47□□□□□ -0.25
HDAC8-215ENST00000444609 FLT3LGP49771 235 aa13.47□□□□□ -0.25
HDAC8-215ENST00000444609 SNAPC2Q13487 334 aa13.47□□□□□ -0.25
HDAC8-215ENST00000444609 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
HDAC8-215ENST00000444609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
HDAC8-215ENST00000444609 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-215ENST00000444609 VEZTQ9HBM0 779 aa13.47□□□□□ -0.25
HDAC8-215ENST00000444609 CSADQ9Y600 493 aa13.47□□□□□ -0.25
HDAC8-215ENST00000444609 CDH23Q9H251 3354 aa13.46□□□□□ -0.25
HDAC8-215ENST00000444609 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-215ENST00000444609 IRF6O14896 467 aa13.46□□□□□ -0.25
HDAC8-215ENST00000444609 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
HDAC8-215ENST00000444609 ADAMTS19Q8TE59 1207 aa13.46□□□□□ -0.25
HDAC8-215ENST00000444609 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
HDAC8-215ENST00000444609 ATXN2LQ8WWM7 1075 aaKnown RBP13.46□□□□□ -0.25
HDAC8-215ENST00000444609 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
HDAC8-215ENST00000444609 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms