RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 TBC1D9BQ66K14 1250 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 CREB3L3Q68CJ9 461 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 DHX32Q7L7V1 743 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 SGMS1Q86VZ5 419 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 SLF2Q8IX21 1173 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 SP8Q8IXZ3 490 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 CNBD1Q8NA66 436 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 SPATA5Q8NB90 893 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 GRAPLQ8TC17 118 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 TBC1D22AQ8WUA7 517 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 AKT1S1Q96B36 256 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 RBM17Q96I25 401 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 TMX3Q96JJ7 454 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 TMEM87BQ96K49 555 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 NEK1Q96PY6 1258 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 PUS3Q9BZE2 481 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 NACAP1Q9BZK3 213 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 KRT23Q9C075 422 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 RNF41Q9H4P4 317 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 ANO8Q9HCE9 1232 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 ATP8A2Q9NTI2 1148 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 TLR7Q9NYK1 1049 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 XDHP47989 1333 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 WDR33Q9C0J8 1336 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 IRS2Q9Y4H2 1338 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 NID2Q14112 1375 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 LTBP1Q14766 1721 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 TIAM2Q8IVF5 1701 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 A0A0D9SFI3 127 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 A0A0G2JS52 829 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 CCDC196A0A1B0GTZ2 297 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 TCRBV5S4A2TA0A5A2 114 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 GOLIM4O00461 696 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF213O14771 459 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 BRD1O95696 1058 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 MBD3O95983 291 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 SERPINB2P05120 415 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 CYP21A2P08686 494 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 IL1R1P14778 569 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 NPR1P16066 1061 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 PLCG2P16885 1265 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 HIBADHP31937 336 aaKnown RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 MCM4P33991 863 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 MCM5P33992 734 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 LIFRP42702 1097 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 MCAMP43121 646 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 KCNJ4P48050 445 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 GSTO1P78417 241 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 HDLBPQ00341 1268 aaKnown RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 TRDNQ13061 729 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 NFIXQ14938 502 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 WASHC4Q2M389 1173 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ERFEQ4G0M1 354 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 SBK1Q52WX2 424 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 PPP4R3BQ5MIZ7 849 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 SLC9C2Q5TAH2 1124 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 STYK1Q6J9G0 422 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 PRR5LQ6MZQ0 368 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF804AQ7Z570 1209 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 PODNQ7Z5L7 613 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 PROM2Q8N271 834 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 TMEM87AQ8NBN3 555 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 TDRD7Q8NHU6 1098 aaKnown RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 NCOA7Q8NI08 942 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 KLHDC4Q8TBB5 520 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF594Q96JF6 807 aaPredicted RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 FAM84BQ96KN1 310 aaPredicted RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 FAM227BQ96M60 508 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 STRBPQ96SI9 672 aaKnown RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 MAP3K14Q99558 947 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 TMX4Q9H1E5 349 aaPredicted RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ZSCAN16Q9H4T2 348 aaPredicted RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF287Q9HBT7 754 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 LRRC4BQ9NT99 713 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF330Q9Y3S2 320 aaPredicted RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 MORC2Q9Y6X9 1032 aaPredicted RBP3.35□□□□□ -1.87
LINC00393-201ENST00000443621 MAST3O60307 1309 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 ELP1O95163 1332 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 FAM205AQ6ZU69 1335 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 C10orf71Q711Q0 1435 aa3.35□□□□□ -1.87
LINC00393-201ENST00000443621 EP400Q96L91 3159 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 DLEC1Q9Y238 1755 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 E7EWF7 191 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 POLRMTO00411 1230 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 GPAA1O43292 621 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 PFKFB2O60825 505 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CDKL5O76039 1030 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 LETM1O95202 739 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 BAG3O95817 575 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 FGAP02671 866 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SLC3A2P08195 630 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CALM1P0DP23 149 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CALM2P0DP24 149 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CALM3P0DP25 149 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SRGNP10124 158 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 HCLS1P14317 486 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 PDE6AP16499 860 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CASTP20810 708 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SMARCA1P28370 1054 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms