RNA–Protein interactions for RNA: ENST00000443501.1

FNDC3B-206, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-206ENST00000443501 ANKRD36CQ5JPF3 1778 aa10.66□□□□□ -0.7
FNDC3B-206ENST00000443501 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 HCLS1P14317 486 aaPredicted RBP10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 GPSM2P81274 684 aa10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 UBE2Q1Q7Z7E8 422 aa10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 TBC1D16Q8TBP0 767 aa10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 PHACTR3Q96KR7 559 aa10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 ZC3H12CQ9C0D7 883 aaKnown RBP10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
FNDC3B-206ENST00000443501 LAMB4A4D0S4 1761 aa10.65□□□□□ -0.71
FNDC3B-206ENST00000443501 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 MYL6BP14649 208 aa10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 NBPF9Q3BBW0 867 aa10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 DEFB123Q8N688 67 aa10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 RTF1Q92541 710 aaKnown RBP10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 SHISA4Q96DD7 197 aa10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 SLC10A4Q96EP9 437 aa10.64□□□□□ -0.71
FNDC3B-206ENST00000443501 ERBB4Q15303 1308 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 LAMB2P55268 1798 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 UNCXA6NJT0 531 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 MAP3K9P80192 1104 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 TAF7Q15545 349 aaPredicted RBP10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 MAP3K11Q16584 847 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 MCM10Q7L590 875 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 NKX2-3Q8TAU0 364 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 CELF1Q92879 486 aaKnown RBP10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 ANGEL1Q9UNK9 670 aaKnown RBP10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 SPTBN5Q9NRC6 3674 aaKnown RBP10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 SCN9AQ15858 1988 aa10.63□□□□□ -0.71
FNDC3B-206ENST00000443501 LAMB1P07942 1786 aa10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 COL3A1P02461 1466 aaPredicted RBP10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 SH3TC1Q8TE82 1336 aa10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 HTATSF1O43719 755 aaKnown RBP10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 MYCP01106 439 aaPredicted RBP10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 PRKG1Q13976 671 aa10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 NLRP10Q86W26 655 aa10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 MTMR10Q9NXD2 777 aa10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 PODXL2Q9NZ53 605 aa10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
FNDC3B-206ENST00000443501 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
FNDC3B-206ENST00000443501 WNT10BO00744 389 aa10.61□□□□□ -0.71
FNDC3B-206ENST00000443501 HSP90AB3PQ58FF7 597 aa10.61□□□□□ -0.71
FNDC3B-206ENST00000443501 SMYD5Q6GMV2 418 aa10.61□□□□□ -0.71
FNDC3B-206ENST00000443501 SH3TC2Q8TF17 1288 aa10.61□□□□□ -0.71
FNDC3B-206ENST00000443501 PTPN18Q99952 460 aa10.61□□□□□ -0.71
FNDC3B-206ENST00000443501 TRMT112Q9UI30 125 aaKnown RBP10.61□□□□□ -0.71
FNDC3B-206ENST00000443501 VCANP13611 3396 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 USP17L3A6NCW0 530 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 USP17L4A6NCW7 530 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 GJA8P48165 433 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 MMP14P50281 582 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 SF3B3Q15393 1217 aaKnown RBP10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 USP17L1Q7RTZ2 530 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 LRP10Q7Z4F1 713 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 APOBEC3FQ8IUX4 373 aaKnown RBP10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 CLMNQ96JQ2 1002 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
FNDC3B-206ENST00000443501 ZNF646O15015 1829 aaPredicted RBP10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 GNRH1P01148 92 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 BMP8BP34820 402 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 PRMT2P55345 433 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 EIF4A1P60842 406 aaKnown RBP10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 Q7L0L9 218 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 PODNQ7Z5L7 613 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 MIS18AQ9NYP9 233 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 STAP2Q9UGK3 403 aa10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 COL1A1P02452 1464 aaPredicted RBP10.59□□□□□ -0.71
FNDC3B-206ENST00000443501 TAF1P21675 1872 aa10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 PPP1R12BO60237 982 aaPredicted RBP10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 UFL1O94874 794 aa10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 GJB1P08034 283 aa10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 RPS8P62241 208 aaKnown RBP10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 DCTN1Q14203 1278 aa10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 MTFR1Q15390 333 aa10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 LRIT3Q3SXY7 679 aa10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 FZD1Q9UP38 647 aa10.58□□□□□ -0.72
FNDC3B-206ENST00000443501 PSME4Q14997 1843 aa10.57□□□□□ -0.72
FNDC3B-206ENST00000443501 EVI5O60447 810 aa10.57□□□□□ -0.72
FNDC3B-206ENST00000443501 GJA5P36382 358 aa10.57□□□□□ -0.72
FNDC3B-206ENST00000443501 GDF15Q99988 308 aa10.57□□□□□ -0.72
FNDC3B-206ENST00000443501 ZFYVE28Q9HCC9 887 aa10.57□□□□□ -0.72
FNDC3B-206ENST00000443501 GGA1Q9UJY5 639 aa10.57□□□□□ -0.72
FNDC3B-206ENST00000443501 MYO3BQ8WXR4 1341 aa10.57□□□□□ -0.72
FNDC3B-206ENST00000443501 GRXCR2A6NFK2 248 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 SASH1O94885 1247 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 COL9A1P20849 921 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 DACT2Q5SW24 774 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 ZBED3Q96IU2 234 aaPredicted RBP10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 DEFB129Q9H1M3 183 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 ANKIB1Q9P2G1 1089 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 COL4A1P02462 1669 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 SSC5DA1L4H1 1573 aa10.56□□□□□ -0.72
FNDC3B-206ENST00000443501 CLSPNQ9HAW4 1339 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 767.2 ms