RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
ABCF1-203ENST00000441867 COL4A1P02462 1669 aa11.89□□□□□ -0.51
ABCF1-203ENST00000441867 MYD88Q99836 296 aa11.88□□□□□ -0.51
ABCF1-203ENST00000441867 PTPN18Q99952 460 aa11.88□□□□□ -0.51
ABCF1-203ENST00000441867 ANKRD2Q9GZV1 360 aa11.88□□□□□ -0.51
ABCF1-203ENST00000441867 ZFYVE28Q9HCC9 887 aa11.88□□□□□ -0.51
ABCF1-203ENST00000441867 RBM27Q9P2N5 1060 aaKnown RBP11.88□□□□□ -0.51
ABCF1-203ENST00000441867 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
ABCF1-203ENST00000441867 DLG5Q8TDM6 1919 aa11.88□□□□□ -0.51
ABCF1-203ENST00000441867 WTIPA6NIX2 430 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-203ENST00000441867 GNRH1P01148 92 aa11.87□□□□□ -0.51
ABCF1-203ENST00000441867 CTSWP56202 376 aa11.87□□□□□ -0.51
ABCF1-203ENST00000441867 GTF2IP78347 998 aa11.87□□□□□ -0.51
ABCF1-203ENST00000441867 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
ABCF1-203ENST00000441867 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
ABCF1-203ENST00000441867 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
ABCF1-203ENST00000441867 PTCH2Q9Y6C5 1203 aa11.87□□□□□ -0.51
ABCF1-203ENST00000441867 RBBP6Q7Z6E9 1792 aaKnown RBP11.87□□□□□ -0.51
ABCF1-203ENST00000441867 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
ABCF1-203ENST00000441867 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
ABCF1-203ENST00000441867 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
ABCF1-203ENST00000441867 PRMT2P55345 433 aa11.86□□□□□ -0.51
ABCF1-203ENST00000441867 KIF22Q14807 665 aa11.86□□□□□ -0.51
ABCF1-203ENST00000441867 DPF3Q92784 378 aa11.86□□□□□ -0.51
ABCF1-203ENST00000441867 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
ABCF1-203ENST00000441867 GJA5P36382 358 aa11.85□□□□□ -0.51
ABCF1-203ENST00000441867 IGHMBP2P38935 993 aaKnown RBP11.85□□□□□ -0.51
ABCF1-203ENST00000441867 GTF2A2P52657 109 aa11.85□□□□□ -0.51
ABCF1-203ENST00000441867 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
ABCF1-203ENST00000441867 TTLL11Q8NHH1 800 aa11.85□□□□□ -0.51
ABCF1-203ENST00000441867 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
ABCF1-203ENST00000441867 HTATIP2Q9BUP3 242 aa11.85□□□□□ -0.51
ABCF1-203ENST00000441867 METTL22Q9BUU2 404 aaPredicted RBP11.85□□□□□ -0.51
ABCF1-203ENST00000441867 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
ABCF1-203ENST00000441867 NR2E3Q9Y5X4 410 aa11.85□□□□□ -0.51
ABCF1-203ENST00000441867 PSME4Q14997 1843 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 KCNJ4P48050 445 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 TNFAIP1Q13829 316 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 RASA3Q14644 834 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-203ENST00000441867 TXNRD3Q86VQ6 643 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-203ENST00000441867 OPTNQ96CV9 577 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 GREM2Q9H772 168 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
ABCF1-203ENST00000441867 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 A0A1W2PPC1 479 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 FKBP1AP62942 108 aaKnown RBP11.83□□□□□ -0.52
ABCF1-203ENST00000441867 CAP1Q01518 475 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 CCL15Q16663 113 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 CFAP100Q494V2 611 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 BRI3BPQ8WY22 251 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 PHAXQ9H814 394 aaKnown RBP11.83□□□□□ -0.52
ABCF1-203ENST00000441867 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 CD209Q9NNX6 404 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 ZCCHC17Q9NP64 241 aaKnown RBP11.83□□□□□ -0.52
ABCF1-203ENST00000441867 SSC5DA1L4H1 1573 aa11.83□□□□□ -0.52
ABCF1-203ENST00000441867 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
ABCF1-203ENST00000441867 MYCP01106 439 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-203ENST00000441867 HELBQ8NG08 1087 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-203ENST00000441867 PRMT6Q96LA8 375 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-203ENST00000441867 MPHOSPH8Q99549 860 aa11.82□□□□□ -0.52
ABCF1-203ENST00000441867 COL25A1Q9BXS0 654 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-203ENST00000441867 PRO3102Q9H379 93 aa11.82□□□□□ -0.52
ABCF1-203ENST00000441867 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
ABCF1-203ENST00000441867 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
ABCF1-203ENST00000441867 TLR2O60603 784 aa11.81□□□□□ -0.52
ABCF1-203ENST00000441867 MAP3K9P80192 1104 aa11.81□□□□□ -0.52
ABCF1-203ENST00000441867 LACTBP83111 547 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-203ENST00000441867 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
ABCF1-203ENST00000441867 C15orf52Q6ZUT6 534 aaKnown RBP11.81□□□□□ -0.52
ABCF1-203ENST00000441867 CERS5Q8N5B7 392 aa11.81□□□□□ -0.52
ABCF1-203ENST00000441867 CSADQ9Y600 493 aa11.81□□□□□ -0.52
ABCF1-203ENST00000441867 CETPP11597 493 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 KLRK1P26718 216 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 HOXD10P28358 340 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.528e-7■□□□□ 8.3
ABCF1-203ENST00000441867 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-203ENST00000441867 ZNF804AQ7Z570 1209 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 RUNDC1Q96C34 613 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 MAP3K2Q9Y2U5 619 aa11.8□□□□□ -0.52
ABCF1-203ENST00000441867 F8W031 263 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-203ENST00000441867 SOX1O00570 391 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-203ENST00000441867 GJB1P08034 283 aa11.79□□□□□ -0.52
ABCF1-203ENST00000441867 IL1R1P14778 569 aa11.79□□□□□ -0.52
ABCF1-203ENST00000441867 CAPN2P17655 700 aa11.79□□□□□ -0.52
ABCF1-203ENST00000441867 GJA8P48165 433 aa11.79□□□□□ -0.52
ABCF1-203ENST00000441867 CALD1Q05682 793 aaKnown RBP11.79□□□□□ -0.52
ABCF1-203ENST00000441867 VGLL4Q14135 290 aa11.79□□□□□ -0.52
ABCF1-203ENST00000441867 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
ABCF1-203ENST00000441867 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
ABCF1-203ENST00000441867 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms