RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NCKAP5LQ9HCH0 1330 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 AFMP43652 599 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 ASIC1P78348 528 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 SPAG5Q96R06 1193 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
PTPN13-204ENST00000436978 STK24Q9Y6E0 443 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 PTPRKQ15262 1439 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 SNX21Q969T3 373 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 PPM1EQ8WY54 764 aa18■□□□□ 0.47
PTPN13-204ENST00000436978 CNBD1Q8NA66 436 aa18■□□□□ 0.47
PTPN13-204ENST00000436978 PANK2Q9BZ23 570 aa18■□□□□ 0.47
PTPN13-204ENST00000436978 MMRN2Q9H8L6 949 aa18■□□□□ 0.47
PTPN13-204ENST00000436978 PARP1P09874 1014 aaKnown RBP18■□□□□ 0.47
PTPN13-204ENST00000436978 VTI1AQ96AJ9 217 aa18■□□□□ 0.47
PTPN13-204ENST00000436978 CCDC175P0C221 793 aa18■□□□□ 0.47
PTPN13-204ENST00000436978 CEP85Q6P2H3 762 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
PTPN13-204ENST00000436978 KRT79Q5XKE5 535 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 CEP135Q66GS9 1140 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 RUFY3Q7L099 469 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 GDPD2Q9HCC8 539 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 TRMT1Q9NXH9 659 aaKnown RBP17.99■□□□□ 0.47
PTPN13-204ENST00000436978 HOOK2Q96ED9 719 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 TRMT1LQ7Z2T5 733 aaKnown RBP17.99■□□□□ 0.47
PTPN13-204ENST00000436978 CCDC155Q8N6L0 562 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 CEP83Q9Y592 693 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 GNPATO15228 680 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 AKR1B10O60218 316 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 TFCP2Q12800 502 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 CEP112Q8N8E3 955 aa17.99■□□□□ 0.47
PTPN13-204ENST00000436978 IQSEC3Q9UPP2 1182 aaPredicted RBP17.99■□□□□ 0.47
PTPN13-204ENST00000436978 HSF2BPO75031 334 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 SPECC1LQ69YQ0 1117 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 TUBB4AP04350 444 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 GLT8D2Q9H1C3 349 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 HOXB7P09629 217 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 TUBB4BP68371 445 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 ANO6Q4KMQ2 910 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 TTC6Q86TZ1 520 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 F13A1P00488 732 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 ISM2Q6H9L7 571 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 NECAB1Q8N987 351 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 UBE4AQ14139 1066 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 NEO1Q92859 1461 aa17.98■□□□□ 0.47
PTPN13-204ENST00000436978 FBLN1P23142 703 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 DTHD1Q6ZMT9 781 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 CREB3L3Q68CJ9 461 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 STMN4Q9H169 189 aaPredicted RBP17.97■□□□□ 0.47
PTPN13-204ENST00000436978 TSGA10Q9BZW7 698 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 ARHGEF10LQ9HCE6 1279 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 BTG4Q9NY30 223 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 NSFL1CQ9UNZ2 370 aaKnown RBP17.97■□□□□ 0.47
PTPN13-204ENST00000436978 CNPY2Q9Y2B0 182 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 SPTLC2O15270 562 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 PICK1Q9NRD5 415 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 CA8P35219 290 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 DCTPP1Q9H773 170 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 AOX1Q06278 1338 aa17.97■□□□□ 0.47
PTPN13-204ENST00000436978 DHX32Q7L7V1 743 aaKnown RBP17.97■□□□□ 0.47
PTPN13-204ENST00000436978 PPP1R2P41236 205 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 TBX22Q9Y458 520 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 KRT83P78385 493 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 CABLES1Q8TDN4 633 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 HS2ST1Q7LGA3 356 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 MAP3K9P80192 1104 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 MAATS1Q7Z4T9 603 aa17.96■□□□□ 0.47
PTPN13-204ENST00000436978 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.46
PTPN13-204ENST00000436978 CTAGE9A4FU28 777 aa17.95■□□□□ 0.46
PTPN13-204ENST00000436978 KDM5CP41229 1560 aa17.95■□□□□ 0.46
PTPN13-204ENST00000436978 USP48Q86UV5 1035 aa17.95■□□□□ 0.46
PTPN13-204ENST00000436978 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
PTPN13-204ENST00000436978 DDX21Q9NR30 783 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTPN13-204ENST00000436978 FAM200AQ8TCP9 573 aa17.95■□□□□ 0.46
PTPN13-204ENST00000436978 EYA1Q99502 592 aa17.95■□□□□ 0.46
PTPN13-204ENST00000436978 PPP1R14CQ8TAE6 165 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 ERICH4A6NGS2 130 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 SYNMO15061 1565 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 MCM7P33993 719 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 GNG11P61952 73 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 NEK11Q8NG66 645 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 PA2G4Q9UQ80 394 aaKnown RBP17.94■□□□□ 0.46
PTPN13-204ENST00000436978 FRMD4BQ9Y2L6 1034 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 NPC1L1Q9UHC9 1359 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 PZPP20742 1482 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 INTS4Q96HW7 963 aaKnown RBP17.94■□□□□ 0.46
PTPN13-204ENST00000436978 TMX1Q9H3N1 280 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 STK32BQ9NY57 414 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 TMOD4Q9NZQ9 345 aa17.94■□□□□ 0.46
PTPN13-204ENST00000436978 ATP2A1O14983 1001 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 VAMP4O75379 141 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 MRPS9P82933 396 aaKnown RBP17.93■□□□□ 0.46
PTPN13-204ENST00000436978 ZNF790Q6PG37 636 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 MIGA1Q8NAN2 632 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 PREX2Q70Z35 1606 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 TACC1O75410 805 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms