RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 KRT5P13647 590 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 AZI2Q9H6S1 392 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 RILPL1Q5EBL4 403 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 WAPLQ7Z5K2 1190 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
SCN4A-201ENST00000435607 ITIH3Q06033 890 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 ZNF569Q5MCW4 686 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
SCN4A-201ENST00000435607 EPB41P11171 864 aaKnown RBP12.6□□□□□ -0.39
SCN4A-201ENST00000435607 AFMP43652 599 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 UBASH3AP57075 661 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 LIN9Q5TKA1 542 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 FAM200AQ8TCP9 573 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 KLF18A0A0U1RQI7 1052 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
SCN4A-201ENST00000435607 SMARCA5O60264 1052 aaPredicted RBP12.59□□□□□ -0.39
SCN4A-201ENST00000435607 GJB2P29033 226 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 TMX1Q9H3N1 280 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 MCM9Q9NXL9 1143 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 GOLGA6CA6NDK9 693 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 GOLGA6BA6NDN3 693 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
SCN4A-201ENST00000435607 KRT86O43790 486 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 GOLGA6DP0CG33 693 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 KRT2P35908 639 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 PPP1R2P41236 205 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 CARD10Q9BWT7 1032 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 GOLGA6AQ9NYA3 693 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 SSFA2P28290 1259 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 GTF3C6Q969F1 213 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
SCN4A-201ENST00000435607 FAM135AQ9P2D6 1515 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 AKNAQ7Z591 1439 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 MCM4P33991 863 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 GNG11P61952 73 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
SCN4A-201ENST00000435607 RBM28Q9NW13 759 aaKnown RBP12.59□□□□□ -0.39
SCN4A-201ENST00000435607 CD109Q6YHK3 1445 aa12.58□□□□□ -0.39
SCN4A-201ENST00000435607 SETDB1Q15047 1291 aa12.58□□□□□ -0.39
SCN4A-201ENST00000435607 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.39
SCN4A-201ENST00000435607 DTHD1Q6ZMT9 781 aa12.58□□□□□ -0.39
SCN4A-201ENST00000435607 PRKAG2Q9UGJ0 569 aa12.58□□□□□ -0.39
SCN4A-201ENST00000435607 TSGA10Q9BZW7 698 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 TRIM75PA6NK02 468 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 RIMBP2O15034 1052 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 P4HA1P13674 534 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 RAB3GAP1Q15042 981 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 ZBED4O75132 1171 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
SCN4A-201ENST00000435607 TAOK1Q7L7X3 1001 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 SMCR8Q8TEV9 937 aaPredicted RBP12.58□□□□□ -0.4
SCN4A-201ENST00000435607 CIB2O75838 187 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 PARP1P09874 1014 aaKnown RBP12.58□□□□□ -0.4
SCN4A-201ENST00000435607 PPP1R21Q6ZMI0 780 aa12.58□□□□□ -0.4
SCN4A-201ENST00000435607 ZSCAN30Q86W11 494 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
SCN4A-201ENST00000435607 KIF3CO14782 793 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 CTAGE15A4D2H0 777 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 CTAGE9A4FU28 777 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 PFDN6O15212 129 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 OATP04181 439 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 CTAGE8P0CG41 777 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 HARSP12081 509 aaKnown RBP12.57□□□□□ -0.4
SCN4A-201ENST00000435607 CTAGE6Q86UF2 777 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 CTAGE4Q8IX94 777 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 H0YIN7 160 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 GPR162Q16538 588 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 CCDC42Q96M95 316 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCN4A-201ENST00000435607 ANKFY1Q9P2R3 1169 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
SCN4A-201ENST00000435607 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
SCN4A-201ENST00000435607 ATP6V1E1P36543 226 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 ZNF165P49910 485 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 ESYT2A0FGR8 921 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 CCDC169A6NNP5 214 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 H7C1D1 291 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 VWA3BQ502W6 1294 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 SELENOSQ9BQE4 189 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 HSPA1LP34931 641 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 UBE2HP62256 183 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 PAXBP1Q9Y5B6 917 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 F6X3S4 739 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 ISM2Q6H9L7 571 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
SCN4A-201ENST00000435607 FAM193BQ96PV7 902 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms