RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 NOD1Q9Y239 953 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 YEATS4O95619 227 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 PRKCSHP14314 528 aaPredicted RBP17.86■□□□□ 0.45
NEDD4-202ENST00000435532 FERMT1Q9BQL6 677 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 LOC102724428A0A0B4J2F2 783 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 PHACTR2O75167 634 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 SIK1P57059 783 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 TMC4Q7Z404 712 aa17.86■□□□□ 0.45
NEDD4-202ENST00000435532 DCPSQ96C86 337 aaKnown RBP17.86■□□□□ 0.45
NEDD4-202ENST00000435532 KRT79Q5XKE5 535 aa17.85■□□□□ 0.45
NEDD4-202ENST00000435532 DCAF15Q66K64 600 aa17.85■□□□□ 0.45
NEDD4-202ENST00000435532 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
NEDD4-202ENST00000435532 CTSWP56202 376 aa17.85■□□□□ 0.45
NEDD4-202ENST00000435532 USO1O60763 962 aaKnown RBP17.85■□□□□ 0.45
NEDD4-202ENST00000435532 KCNG4Q8TDN1 519 aa17.85■□□□□ 0.45
NEDD4-202ENST00000435532 PATL2C9JE40 543 aaKnown RBP17.84■□□□□ 0.45
NEDD4-202ENST00000435532 BACH1O14867 736 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 IMPG2Q9BZV3 1241 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 GCC2Q8IWJ2 1684 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 IRX3P78415 501 aaPredicted RBP17.84■□□□□ 0.45
NEDD4-202ENST00000435532 PABPC4Q13310 644 aaKnown RBP eCLIP17.84■□□□□ 0.45
NEDD4-202ENST00000435532 ARHGEF6Q15052 776 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 PUF60Q9UHX1 559 aaKnown RBP17.84■□□□□ 0.45
NEDD4-202ENST00000435532 ANKARQ7Z5J8 1434 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 ATP7BP35670 1465 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 MCM4P33991 863 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 USP8P40818 1118 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 TEKT1Q969V4 418 aa17.84■□□□□ 0.45
NEDD4-202ENST00000435532 LARP6Q9BRS8 491 aaKnown RBP17.84■□□□□ 0.45
NEDD4-202ENST00000435532 DKC1O60832 514 aaKnown RBP eCLIP17.83■□□□□ 0.45
NEDD4-202ENST00000435532 ERLIN1O75477 346 aa17.83■□□□□ 0.45
NEDD4-202ENST00000435532 TOP1P11387 765 aaKnown RBP17.83■□□□□ 0.45
NEDD4-202ENST00000435532 SKIDA1Q1XH10 827 aa17.83■□□□□ 0.45
NEDD4-202ENST00000435532 TDRD12Q587J7 1177 aaKnown RBP17.83■□□□□ 0.45
NEDD4-202ENST00000435532 TCHPQ9BT92 498 aa17.83■□□□□ 0.45
NEDD4-202ENST00000435532 TBC1D5Q92609 795 aa17.83■□□□□ 0.44
NEDD4-202ENST00000435532 NUP88Q99567 741 aaPredicted RBP17.83■□□□□ 0.44
NEDD4-202ENST00000435532 FAM13AO94988 1023 aa17.83■□□□□ 0.44
NEDD4-202ENST00000435532 IGHDP01880 384 aa17.83■□□□□ 0.44
NEDD4-202ENST00000435532 FILIP1Q7Z7B0 1213 aa17.83■□□□□ 0.44
NEDD4-202ENST00000435532 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 STX1AQ16623 288 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 MYOM2P54296 1465 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
NEDD4-202ENST00000435532 ZSCAN12O43309 604 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 SEPT12Q8IYM1 358 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.82■□□□□ 0.44
NEDD4-202ENST00000435532 USP19O94966 1318 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 ECM2O94769 699 aaPredicted RBP17.82■□□□□ 0.44
NEDD4-202ENST00000435532 LRRC2Q9BYS8 371 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 TAF5LO75529 589 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 CCDC24Q8N4L8 307 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 APPBP2Q92624 585 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 STK24Q9Y6E0 443 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 G2E3Q7L622 706 aa17.82■□□□□ 0.44
NEDD4-202ENST00000435532 SFPQP23246 707 aaKnown RBP eCLIP17.81■□□□□ 0.44
NEDD4-202ENST00000435532 ARHGEF25Q86VW2 580 aa17.81■□□□□ 0.44
NEDD4-202ENST00000435532 DHX32Q7L7V1 743 aaKnown RBP17.81■□□□□ 0.44
NEDD4-202ENST00000435532 SULF1Q8IWU6 871 aa17.81■□□□□ 0.44
NEDD4-202ENST00000435532 SBNO2Q9Y2G9 1366 aa17.81■□□□□ 0.44
NEDD4-202ENST00000435532 CRKLP46109 303 aaKnown RBP17.81■□□□□ 0.44
NEDD4-202ENST00000435532 ARMT1Q9H993 441 aa17.81■□□□□ 0.44
NEDD4-202ENST00000435532 OTUD7BQ6GQQ9 843 aa17.81■□□□□ 0.44
NEDD4-202ENST00000435532 TMEM87BQ96K49 555 aa17.81■□□□□ 0.44
NEDD4-202ENST00000435532 CTNNA2P26232 953 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 USPL1Q5W0Q7 1092 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 LRRC45Q96CN5 670 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 TRIM47Q96LD4 638 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 GPCPD1Q9NPB8 672 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 PRKG1Q13976 671 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 ZNF594Q96JF6 807 aaPredicted RBP17.8■□□□□ 0.44
NEDD4-202ENST00000435532 KIF24Q5T7B8 1368 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 AOX1Q06278 1338 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 MAP3K15Q6ZN16 1313 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 SYKP43405 635 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 TIMM10P62072 90 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 SMCR8Q8TEV9 937 aaPredicted RBP17.8■□□□□ 0.44
NEDD4-202ENST00000435532 SUCLG2Q96I99 432 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
NEDD4-202ENST00000435532 FAM177A1Q8N128 213 aaPredicted RBP17.8■□□□□ 0.44
NEDD4-202ENST00000435532 AATFQ9NY61 560 aaKnown RBP eCLIP17.8■□□□□ 0.44
NEDD4-202ENST00000435532 ZBTB38Q8NAP3 1195 aaPredicted RBP17.79■□□□□ 0.44
NEDD4-202ENST00000435532 CCDC97Q96F63 343 aaPredicted RBP17.79■□□□□ 0.44
NEDD4-202ENST00000435532 SYNCQ9H7C4 482 aa17.79■□□□□ 0.44
NEDD4-202ENST00000435532 PPEF1O14829 653 aaPredicted RBP17.79■□□□□ 0.44
NEDD4-202ENST00000435532 GTF2IP78347 998 aa17.79■□□□□ 0.44
NEDD4-202ENST00000435532 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
NEDD4-202ENST00000435532 IL6STP40189 918 aaPredicted RBP17.79■□□□□ 0.44
NEDD4-202ENST00000435532 LZTS2Q9BRK4 669 aa17.79■□□□□ 0.44
NEDD4-202ENST00000435532 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
NEDD4-202ENST00000435532 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.79■□□□□ 0.44
NEDD4-202ENST00000435532 USP40Q9NVE5 1235 aa17.79■□□□□ 0.44
NEDD4-202ENST00000435532 TTF2Q9UNY4 1162 aaKnown RBP17.79■□□□□ 0.44
NEDD4-202ENST00000435532 EZRP15311 586 aaKnown RBP17.78■□□□□ 0.44
NEDD4-202ENST00000435532 KIF1BO60333 1816 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 SPC25Q9HBM1 224 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms