RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 EVCP57679 992 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 TTC6Q86TZ1 520 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 MPHOSPH8Q99549 860 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 WDR19Q8NEZ3 1342 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 TOM1O60784 492 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 PHKA1P46020 1223 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 HS1BP3Q53T59 392 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 SLC9C2Q5TAH2 1124 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 NAA16Q6N069 864 aaPredicted RBP19.71■□□□□ 0.75
LIMK1-203ENST00000435201 DOCK2Q92608 1830 aa19.71■□□□□ 0.75
LIMK1-203ENST00000435201 ZNF213O14771 459 aa19.7■□□□□ 0.74
LIMK1-203ENST00000435201 NTSR2O95665 410 aa19.7■□□□□ 0.74
LIMK1-203ENST00000435201 MCM5P33992 734 aa19.7■□□□□ 0.74
LIMK1-203ENST00000435201 RESTQ13127 1097 aa19.7■□□□□ 0.74
LIMK1-203ENST00000435201 NCOA7Q8NI08 942 aa19.7■□□□□ 0.74
LIMK1-203ENST00000435201 DDX11Q96FC9 970 aa19.7■□□□□ 0.74
LIMK1-203ENST00000435201 PIH1D3Q9NQM4 214 aaKnown RBP19.7■□□□□ 0.74
LIMK1-203ENST00000435201 NIP7Q9Y221 180 aaKnown RBP eCLIP19.7■□□□□ 0.74
LIMK1-203ENST00000435201 MYH15Q9Y2K3 1946 aa19.7■□□□□ 0.74
LIMK1-203ENST00000435201 MYO5AQ9Y4I1 1855 aaKnown RBP19.69■□□□□ 0.74
LIMK1-203ENST00000435201 PTPDC1A2A3K4 754 aa19.69■□□□□ 0.74
LIMK1-203ENST00000435201 PDIA3P30101 505 aaKnown RBP19.69■□□□□ 0.74
LIMK1-203ENST00000435201 IDH1O75874 414 aaKnown RBP19.69■□□□□ 0.74
LIMK1-203ENST00000435201 IGHMBP2P38935 993 aaKnown RBP19.69■□□□□ 0.74
LIMK1-203ENST00000435201 UVSSAQ2YD98 709 aa19.69■□□□□ 0.74
LIMK1-203ENST00000435201 RALYLQ86SE5 291 aaKnown RBP19.69■□□□□ 0.74
LIMK1-203ENST00000435201 MB21D2Q8IYB1 491 aaPredicted RBP19.69■□□□□ 0.74
LIMK1-203ENST00000435201 RNF214Q8ND24 703 aa19.69■□□□□ 0.74
LIMK1-203ENST00000435201 SPATA32Q96LK8 384 aa19.69■□□□□ 0.74
LIMK1-203ENST00000435201 SALL1Q9NSC2 1324 aa19.68■□□□□ 0.74
LIMK1-203ENST00000435201 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
LIMK1-203ENST00000435201 CTDNEP1O95476 244 aa19.68■□□□□ 0.74
LIMK1-203ENST00000435201 HAND2P61296 217 aa19.68■□□□□ 0.74
LIMK1-203ENST00000435201 FAM173BQ6P4H8 233 aa19.68■□□□□ 0.74
LIMK1-203ENST00000435201 CLEC4GQ6UXB4 293 aa19.68■□□□□ 0.74
LIMK1-203ENST00000435201 PRC1O43663 620 aa19.67■□□□□ 0.74
LIMK1-203ENST00000435201 PDE6AP16499 860 aa19.67■□□□□ 0.74
LIMK1-203ENST00000435201 SPATA5Q8NB90 893 aa19.67■□□□□ 0.74
LIMK1-203ENST00000435201 HELBQ8NG08 1087 aaPredicted RBP19.67■□□□□ 0.74
LIMK1-203ENST00000435201 ZNF532Q9HCE3 1301 aa19.67■□□□□ 0.74
LIMK1-203ENST00000435201 CCT2P78371 535 aaKnown RBP19.67■□□□□ 0.74
LIMK1-203ENST00000435201 CHST3Q7LGC8 479 aa19.67■□□□□ 0.74
LIMK1-203ENST00000435201 LEO1Q8WVC0 666 aaPredicted RBP19.67■□□□□ 0.74
LIMK1-203ENST00000435201 SEC31BQ9NQW1 1179 aa19.67■□□□□ 0.74
LIMK1-203ENST00000435201 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
LIMK1-203ENST00000435201 NAP1L2Q9ULW6 460 aaPredicted RBP19.67■□□□□ 0.74
LIMK1-203ENST00000435201 TCRBV5S4A2TA0A5A2 114 aa19.66■□□□□ 0.74
LIMK1-203ENST00000435201 GOLGA6L4A6NEF3 574 aa19.66■□□□□ 0.74
LIMK1-203ENST00000435201 RGL2O15211 777 aa19.66■□□□□ 0.74
LIMK1-203ENST00000435201 DHX16O60231 1041 aaKnown RBP19.66■□□□□ 0.74
LIMK1-203ENST00000435201 PIP4K2BP78356 416 aa19.66■□□□□ 0.74
LIMK1-203ENST00000435201 TPRNQ4KMQ1 711 aa19.66■□□□□ 0.74
LIMK1-203ENST00000435201 ZMYM6O95789 1325 aa19.66■□□□□ 0.74
LIMK1-203ENST00000435201 MAP3K12Q12852 859 aa19.65■□□□□ 0.74
LIMK1-203ENST00000435201 TRDNQ13061 729 aa19.65■□□□□ 0.74
LIMK1-203ENST00000435201 ZSCAN30Q86W11 494 aa19.65■□□□□ 0.74
LIMK1-203ENST00000435201 KCNQ2O43526 872 aa19.65■□□□□ 0.74
LIMK1-203ENST00000435201 VPS72Q15906 364 aa19.65■□□□□ 0.74
LIMK1-203ENST00000435201 WWC3Q9ULE0 1092 aa19.65■□□□□ 0.74
LIMK1-203ENST00000435201 SCN7AQ01118 1682 aa19.64■□□□□ 0.74
LIMK1-203ENST00000435201 RASGRF1Q13972 1273 aa19.64■□□□□ 0.73
LIMK1-203ENST00000435201 ATL3Q6DD88 541 aa19.64■□□□□ 0.73
LIMK1-203ENST00000435201 AIDAQ96BJ3 306 aa19.64■□□□□ 0.73
LIMK1-203ENST00000435201 CDC5LQ99459 802 aaKnown RBP19.64■□□□□ 0.73
LIMK1-203ENST00000435201 FUCA2Q9BTY2 467 aa19.64■□□□□ 0.73
LIMK1-203ENST00000435201 NCOA5Q9HCD5 579 aaKnown RBP19.64■□□□□ 0.73
LIMK1-203ENST00000435201 TFIP11Q9UBB9 837 aaKnown RBP19.64■□□□□ 0.73
LIMK1-203ENST00000435201 CARMIL3Q8ND23 1372 aa19.64■□□□□ 0.73
LIMK1-203ENST00000435201 ALX1Q15699 326 aa19.63■□□□□ 0.73
LIMK1-203ENST00000435201 FAM98CQ17RN3 349 aaKnown RBP19.63■□□□□ 0.73
LIMK1-203ENST00000435201 CNTNAP4Q9C0A0 1308 aa19.63■□□□□ 0.73
LIMK1-203ENST00000435201 ANTXR2P58335 489 aa19.62■□□□□ 0.73
LIMK1-203ENST00000435201 LINC00116Q8NCU8 138 aa19.62■□□□□ 0.73
LIMK1-203ENST00000435201 STRBPQ96SI9 672 aaKnown RBP19.62■□□□□ 0.73
LIMK1-203ENST00000435201 NUP62CLQ9H1M0 184 aa19.62■□□□□ 0.73
LIMK1-203ENST00000435201 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
LIMK1-203ENST00000435201 A0A1B0GUL6 1792 aa19.62■□□□□ 0.73
LIMK1-203ENST00000435201 KLF18A0A0U1RQI7 1052 aa19.62■□□□□ 0.73
LIMK1-203ENST00000435201 APPP05067 770 aa19.62■□□□□ 0.73
LIMK1-203ENST00000435201 GIMAP6Q6P9H5 292 aa19.62■□□□□ 0.73
LIMK1-203ENST00000435201 BCL9LQ86UU0 1499 aa19.61■□□□□ 0.73
LIMK1-203ENST00000435201 CASZ1Q86V15 1759 aa19.61■□□□□ 0.73
LIMK1-203ENST00000435201 GOLGA8BA8MQT2 603 aa19.61■□□□□ 0.73
LIMK1-203ENST00000435201 CHRNDQ07001 517 aa19.61■□□□□ 0.73
LIMK1-203ENST00000435201 NBPF3Q9H094 633 aa19.61■□□□□ 0.73
LIMK1-203ENST00000435201 CCDC192P0DO97 292 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 LIG1P18858 919 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 MAP3K11Q16584 847 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 MAGEB6Q8N7X4 407 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 ZNF396Q96N95 335 aaPredicted RBP19.6■□□□□ 0.73
LIMK1-203ENST00000435201 GPHNQ9NQX3 736 aaPredicted RBP19.6■□□□□ 0.73
LIMK1-203ENST00000435201 CCDC39Q9UFE4 941 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 C4AP0C0L4 1744 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 C4BP0C0L5 1744 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 CHD4Q14839 1912 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 PATL2C9JE40 543 aaKnown RBP19.6■□□□□ 0.73
LIMK1-203ENST00000435201 MSNP26038 577 aaKnown RBP19.6■□□□□ 0.73
LIMK1-203ENST00000435201 SF3B3Q15393 1217 aaKnown RBP19.6■□□□□ 0.73
LIMK1-203ENST00000435201 TBC1D10CQ8IV04 446 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 RGS22Q8NE09 1264 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms