RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 XAGE2Q96GT9 111 aa12.39□□□□□ -0.43
CCDC144CP-202ENST00000433419 NOD1Q9Y239 953 aa12.39□□□□□ -0.43
CCDC144CP-202ENST00000433419 FPGT-TNNI3KV9GXZ4 949 aa12.39□□□□□ -0.43
CCDC144CP-202ENST00000433419 CTNNA2P26232 953 aa12.39□□□□□ -0.43
CCDC144CP-202ENST00000433419 TRIM47Q96LD4 638 aa12.39□□□□□ -0.43
CCDC144CP-202ENST00000433419 TCEANC2Q96MN5 208 aa12.39□□□□□ -0.43
CCDC144CP-202ENST00000433419 SBNO2Q9Y2G9 1366 aa12.39□□□□□ -0.43
CCDC144CP-202ENST00000433419 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 GPHNQ9NQX3 736 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 UQCRHLA0A096LP55 91 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 LOC102724428A0A0B4J2F2 783 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 UQCRHP07919 91 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 SIK1P57059 783 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 EIF4A1P60842 406 aaKnown RBP12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 APPBP2Q92624 585 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 PPM1FP49593 454 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 STX1AQ16623 288 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 G2E3Q7L622 706 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 C2CD5Q86YS7 1000 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 NECAB1Q8N987 351 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
CCDC144CP-202ENST00000433419 INSRP06213 1382 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 HS2ST1Q7LGA3 356 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 KIF5CO60282 957 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 SPAG1Q07617 926 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 SAP30BPQ9UHR5 308 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 TNNQ9UQP3 1299 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 CSADQ9Y600 493 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 MLH3Q9UHC1 1453 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 MACROD2A1Z1Q3 448 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 PSMA7O14818 248 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 EAPPQ56P03 285 aaPredicted RBP12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 HOOK3Q86VS8 718 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 UGGT1Q9NYU2 1555 aa12.37□□□□□ -0.43
CCDC144CP-202ENST00000433419 KRT2P35908 639 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 MSL1Q68DK7 614 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 ARHGAP27Q6ZUM4 889 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 SPAG5Q96R06 1193 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 BIN1O00499 593 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 EIF3JO75822 258 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 UBE2HP62256 183 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 DKC1O60832 514 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 ASIC1P78348 528 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 TEKT1Q969V4 418 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 ZBED4O75132 1171 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 TAF5LO75529 589 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 RLBP1P12271 317 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
CCDC144CP-202ENST00000433419 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 FAM13AO94988 1023 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 SYNCQ9H7C4 482 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 PTPRTO14522 1441 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 USP25Q9UHP3 1055 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 N4BP3O15049 544 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 TRIM37O94972 964 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 RRAGBQ5VZM2 374 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 TAX1BP1Q86VP1 789 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 ARHGEF25Q86VW2 580 aa12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 CTNNBL1Q8WYA6 563 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 ZNF594Q96JF6 807 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 CWC15Q9P013 229 aaKnown RBP12.35□□□□□ -0.43
CCDC144CP-202ENST00000433419 GSTTP1A0A1W2PQM5 241 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 ACTN2P35609 894 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 SLC1A4P43007 532 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 USP19O94966 1318 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 LUZP1Q86V48 1076 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 CPLX3Q8WVH0 158 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 MRPS27Q92552 414 aaKnown RBP12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 PLVAPQ9BX97 442 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 CENPHQ9H3R5 247 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 NEMFO60524 1076 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 ZNF165P49910 485 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 GSDMDP57764 484 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 GTF2IP78347 998 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 SPATA5Q8NB90 893 aa12.34□□□□□ -0.43
CCDC144CP-202ENST00000433419 ALS2CR12Q96Q35 445 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms