RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 BACH2Q9BYV9 841 aa32.08■■■□□ 2.73
TMEM248-205ENST00000433271 CHMLP26374 656 aa32.07■■■□□ 2.72
TMEM248-205ENST00000433271 COL1A1P02452 1464 aaPredicted RBP32.06■■■□□ 2.72
TMEM248-205ENST00000433271 KIAA2012Q0VF49 1180 aa32.06■■■□□ 2.72
TMEM248-205ENST00000433271 VPS33BQ9H267 617 aa32.06■■■□□ 2.72
TMEM248-205ENST00000433271 RFX7Q2KHR2 1363 aa32.05■■■□□ 2.72
TMEM248-205ENST00000433271 GOLGB1Q14789 3259 aaKnown RBP32.05■■■□□ 2.72
TMEM248-205ENST00000433271 HIP1O00291 1037 aa32.04■■■□□ 2.72
TMEM248-205ENST00000433271 PIH1D3Q9NQM4 214 aaKnown RBP32.04■■■□□ 2.72
TMEM248-205ENST00000433271 G3V3G9 751 aa32.04■■■□□ 2.72
TMEM248-205ENST00000433271 DCAF8Q5TAQ9 597 aa32.04■■■□□ 2.72
TMEM248-205ENST00000433271 ARFGEF1Q9Y6D6 1849 aa32.03■■■□□ 2.72
TMEM248-205ENST00000433271 LRRFIP1Q32MZ4 808 aaKnown RBP32.03■■■□□ 2.72
TMEM248-205ENST00000433271 PPIP5K2O43314 1243 aa32.02■■■□□ 2.72
TMEM248-205ENST00000433271 AOC3Q16853 763 aa32.02■■■□□ 2.72
TMEM248-205ENST00000433271 DOK7Q18PE1 504 aa32.02■■■□□ 2.72
TMEM248-205ENST00000433271 PODNQ7Z5L7 613 aa32.02■■■□□ 2.72
TMEM248-205ENST00000433271 DIAPH3Q9NSV4 1193 aa32.02■■■□□ 2.72
TMEM248-205ENST00000433271 CHAF1AQ13111 956 aaPredicted RBP32.01■■■□□ 2.72
TMEM248-205ENST00000433271 WDR66Q8TBY9 1149 aa32.01■■■□□ 2.72
TMEM248-205ENST00000433271 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.01■■■□□ 2.72
TMEM248-205ENST00000433271 TAOK3Q9H2K8 898 aa32.01■■■□□ 2.72
TMEM248-205ENST00000433271 MYH13Q9UKX3 1938 aa32.01■■■□□ 2.72
TMEM248-205ENST00000433271 FER1L6Q2WGJ9 1857 aa32.01■■■□□ 2.71
TMEM248-205ENST00000433271 ZNF277Q9NRM2 450 aaPredicted RBP32■■■□□ 2.71
TMEM248-205ENST00000433271 SRCAPQ6ZRS2 3230 aa31.99■■■□□ 2.71
TMEM248-205ENST00000433271 LTBP3Q9NS15 1303 aa31.99■■■□□ 2.71
TMEM248-205ENST00000433271 SALL1Q9NSC2 1324 aa31.99■■■□□ 2.71
TMEM248-205ENST00000433271 NFKBIEO00221 500 aa31.99■■■□□ 2.71
TMEM248-205ENST00000433271 IDH1O75874 414 aaKnown RBP31.99■■■□□ 2.71
TMEM248-205ENST00000433271 DBNDD1Q9H9R9 158 aa31.99■■■□□ 2.71
TMEM248-205ENST00000433271 FAM205AQ6ZU69 1335 aa31.98■■■□□ 2.71
TMEM248-205ENST00000433271 ZFYP08048 801 aaPredicted RBP31.98■■■□□ 2.71
TMEM248-205ENST00000433271 MAP3K12Q12852 859 aa31.98■■■□□ 2.71
TMEM248-205ENST00000433271 ZGPATQ8N5A5 531 aaKnown RBP31.98■■■□□ 2.71
TMEM248-205ENST00000433271 LRP2BPQ9P2M1 347 aa31.98■■■□□ 2.71
TMEM248-205ENST00000433271 ABCF2Q9UG63 623 aa31.98■■■□□ 2.71
TMEM248-205ENST00000433271 RNF113AO15541 343 aaKnown RBP31.97■■■□□ 2.71
TMEM248-205ENST00000433271 ECE2O60344 883 aa31.97■■■□□ 2.71
TMEM248-205ENST00000433271 ZSCAN25Q6NSZ9 544 aa31.97■■■□□ 2.71
TMEM248-205ENST00000433271 EIF5BO60841 1220 aaKnown RBP31.97■■■□□ 2.71
TMEM248-205ENST00000433271 CWC27Q6UX04 472 aaKnown RBP31.97■■■□□ 2.71
TMEM248-205ENST00000433271 LARGE2Q8N3Y3 721 aa31.97■■■□□ 2.71
TMEM248-205ENST00000433271 RUFY2Q8WXA3 655 aa31.97■■■□□ 2.71
TMEM248-205ENST00000433271 JAG2Q9Y219 1238 aa31.97■■■□□ 2.71
TMEM248-205ENST00000433271 IARSP41252 1262 aaKnown RBP31.96■■■□□ 2.71
TMEM248-205ENST00000433271 ESYT1Q9BSJ8 1104 aa31.96■■■□□ 2.71
TMEM248-205ENST00000433271 CHD4Q14839 1912 aa31.95■■■□□ 2.71
TMEM248-205ENST00000433271 NMIQ13287 307 aaPredicted RBP31.95■■■□□ 2.71
TMEM248-205ENST00000433271 SLC9C2Q5TAH2 1124 aa31.95■■■□□ 2.71
TMEM248-205ENST00000433271 TBC1D22AQ8WUA7 517 aa31.95■■■□□ 2.71
TMEM248-205ENST00000433271 IGSF3O75054 1194 aa31.94■■■□□ 2.7
TMEM248-205ENST00000433271 SEC24BO95487 1268 aa31.94■■■□□ 2.7
TMEM248-205ENST00000433271 GTF2IP78347 998 aa31.94■■■□□ 2.7
TMEM248-205ENST00000433271 SPTY2D1Q68D10 685 aaPredicted RBP31.94■■■□□ 2.7
TMEM248-205ENST00000433271 FAM227BQ96M60 508 aa31.94■■■□□ 2.7
TMEM248-205ENST00000433271 DOCK2Q92608 1830 aa31.94■■■□□ 2.7
TMEM248-205ENST00000433271 CHGBP05060 677 aa31.93■■■□□ 2.7
TMEM248-205ENST00000433271 ADD2P35612 726 aa31.93■■■□□ 2.7
TMEM248-205ENST00000433271 TTLL5Q6EMB2 1281 aa31.93■■■□□ 2.7
TMEM248-205ENST00000433271 ERICH6Q7L0X2 663 aa31.93■■■□□ 2.7
TMEM248-205ENST00000433271 MYO5AQ9Y4I1 1855 aaKnown RBP31.93■■■□□ 2.7
TMEM248-205ENST00000433271 RAI14Q9P0K7 980 aa31.93■■■□□ 2.7
TMEM248-205ENST00000433271 SGSM2O43147 1006 aa31.92■■■□□ 2.7
TMEM248-205ENST00000433271 PDE6AP16499 860 aa31.92■■■□□ 2.7
TMEM248-205ENST00000433271 UBE3CQ15386 1083 aa31.92■■■□□ 2.7
TMEM248-205ENST00000433271 ZMYM1Q5SVZ6 1142 aa31.92■■■□□ 2.7
TMEM248-205ENST00000433271 A0A0D9SFI3 127 aa31.91■■■□□ 2.7
TMEM248-205ENST00000433271 HELLSQ9NRZ9 838 aa31.91■■■□□ 2.7
TMEM248-205ENST00000433271 MYH7P12883 1935 aa31.91■■■□□ 2.7
TMEM248-205ENST00000433271 MFSD14BQ5SR56 506 aa31.9■■■□□ 2.7
TMEM248-205ENST00000433271 STRIP1Q5VSL9 837 aa31.9■■■□□ 2.7
TMEM248-205ENST00000433271 MAGEB6Q8N7X4 407 aa31.9■■■□□ 2.7
TMEM248-205ENST00000433271 RAD50Q92878 1312 aa31.9■■■□□ 2.7
TMEM248-205ENST00000433271 LDHBP07195 334 aaKnown RBP31.89■■■□□ 2.7
TMEM248-205ENST00000433271 PRDX5P30044 214 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 SLFNL1Q499Z3 407 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 TMED8Q6PL24 325 aaPredicted RBP31.89■■■□□ 2.7
TMEM248-205ENST00000433271 ARHGAP27Q6ZUM4 889 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 NIM1KQ8IY84 436 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 APPBP2Q92624 585 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 IL25Q9H293 177 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 KCNQ5Q9NR82 932 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 TCRBV5S4A2TA0A5A2 114 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 MCMDC2Q4G0Z9 681 aa31.89■■■□□ 2.7
TMEM248-205ENST00000433271 ZNF532Q9HCE3 1301 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 USP17L3A6NCW0 530 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 USP17L4A6NCW7 530 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 YDJCA8MPS7 323 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 REC8O95072 547 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 MFAP1P55081 439 aaKnown RBP31.88■■■□□ 2.69
TMEM248-205ENST00000433271 RASSF7Q02833 373 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 USP17L1Q7RTZ2 530 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 FBXW7Q969H0 707 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 ZNRF3Q9ULT6 936 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 SUGT1Q9Y2Z0 365 aa31.88■■■□□ 2.69
TMEM248-205ENST00000433271 COL4A5P29400 1685 aa31.87■■■□□ 2.69
TMEM248-205ENST00000433271 YBX3P16989 372 aaKnown RBP eCLIP31.87■■■□□ 2.692e-7■■□□□ 12.6
TMEM248-205ENST00000433271 FKBP1AP62942 108 aaKnown RBP31.87■■■□□ 2.69
TMEM248-205ENST00000433271 JDP2Q8WYK2 163 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms