RNA–Protein interactions for RNA: ENST00000432255.6

CTCFL-208, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-208ENST00000432255 ATP2B3Q16720 1220 aa16.1■□□□□ 0.17
CTCFL-208ENST00000432255 KIF3AQ9Y496 699 aa16.1■□□□□ 0.17
CTCFL-208ENST00000432255 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
CTCFL-208ENST00000432255 ZNF213O14771 459 aa16.1■□□□□ 0.17
CTCFL-208ENST00000432255 ITGA6P23229 1130 aa16.1■□□□□ 0.17
CTCFL-208ENST00000432255 PDE4CQ08493 712 aa16.1■□□□□ 0.17
CTCFL-208ENST00000432255 PIGBQ92521 554 aa16.1■□□□□ 0.17
CTCFL-208ENST00000432255 ZNF396Q96N95 335 aaPredicted RBP16.1■□□□□ 0.17
CTCFL-208ENST00000432255 LLPHQ9BRT6 129 aaKnown RBP16.1■□□□□ 0.17
CTCFL-208ENST00000432255 PCDHA7Q9UN72 937 aa16.1■□□□□ 0.17
CTCFL-208ENST00000432255 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
CTCFL-208ENST00000432255 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
CTCFL-208ENST00000432255 KIF1AQ12756 1690 aa16.09■□□□□ 0.17
CTCFL-208ENST00000432255 MARCKSP29966 332 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-208ENST00000432255 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-208ENST00000432255 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-208ENST00000432255 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
CTCFL-208ENST00000432255 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
CTCFL-208ENST00000432255 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
CTCFL-208ENST00000432255 RCOR1Q9UKL0 485 aa16.09■□□□□ 0.17
CTCFL-208ENST00000432255 MCAMP43121 646 aa16.08■□□□□ 0.17
CTCFL-208ENST00000432255 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.17
CTCFL-208ENST00000432255 GPR108Q9NPR9 543 aa16.08■□□□□ 0.17
CTCFL-208ENST00000432255 COL18A1P39060 1754 aa16.08■□□□□ 0.17
CTCFL-208ENST00000432255 SNW1Q13573 536 aaKnown RBP16.08■□□□□ 0.16
CTCFL-208ENST00000432255 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
CTCFL-208ENST00000432255 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
CTCFL-208ENST00000432255 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.16
CTCFL-208ENST00000432255 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
CTCFL-208ENST00000432255 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
CTCFL-208ENST00000432255 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.16
CTCFL-208ENST00000432255 NDUFA8P51970 172 aa16.08■□□□□ 0.16
CTCFL-208ENST00000432255 TDRD7Q8NHU6 1098 aaKnown RBP16.08■□□□□ 0.16
CTCFL-208ENST00000432255 PHKBQ93100 1093 aa16.08■□□□□ 0.16
CTCFL-208ENST00000432255 ANTXR2P58335 489 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 MICU3Q86XE3 530 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 TRMT1Q9NXH9 659 aaKnown RBP16.07■□□□□ 0.16
CTCFL-208ENST00000432255 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 CIAO1O76071 339 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
CTCFL-208ENST00000432255 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-208ENST00000432255 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-208ENST00000432255 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 LAMA4Q16363 1823 aa16.07■□□□□ 0.16
CTCFL-208ENST00000432255 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
CTCFL-208ENST00000432255 STX1AQ16623 288 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 PLA2G4DQ86XP0 818 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 APPBP2Q92624 585 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 B4E1Z4 1266 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 RBM43Q6ZSC3 357 aaKnown RBP16.06■□□□□ 0.16
CTCFL-208ENST00000432255 PRIMPOLQ96LW4 560 aa16.06■□□□□ 0.16
CTCFL-208ENST00000432255 PHKA1P46020 1223 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 TRDNQ13061 729 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 IQCB1Q15051 598 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
CTCFL-208ENST00000432255 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 NFXL1Q6ZNB6 911 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 PIH1D3Q9NQM4 214 aaKnown RBP16.05■□□□□ 0.16
CTCFL-208ENST00000432255 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 IRS4O14654 1257 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-208ENST00000432255 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-208ENST00000432255 MRPS27Q92552 414 aaKnown RBP16.05■□□□□ 0.16
CTCFL-208ENST00000432255 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 TPM3P06753 285 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 NAA30Q147X3 362 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-208ENST00000432255 PTPN21Q16825 1174 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 AGXT2Q9BYV1 514 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 ATG3Q9NT62 314 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
CTCFL-208ENST00000432255 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-208ENST00000432255 STARD3NLO95772 234 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-208ENST00000432255 TNNT1P13805 278 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 SALL1Q9NSC2 1324 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 USP27XA6NNY8 438 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 MB21D2Q8IYB1 491 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-208ENST00000432255 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
CTCFL-208ENST00000432255 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
CTCFL-208ENST00000432255 LRRFIP1Q32MZ4 808 aaKnown RBP16.03■□□□□ 0.16
CTCFL-208ENST00000432255 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
CTCFL-208ENST00000432255 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
CTCFL-208ENST00000432255 CPDO75976 1380 aa16.03■□□□□ 0.16
CTCFL-208ENST00000432255 SPTLC2O15270 562 aa16.03■□□□□ 0.16
CTCFL-208ENST00000432255 SMC2O95347 1197 aa16.03■□□□□ 0.16
CTCFL-208ENST00000432255 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms